RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TFAP4Q01664 338 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 RTN1Q16799 776 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 EARS2Q5JPH6 523 aaKnown RBP14.14□□□□□ -0.15
PRPF39-203ENST00000477626 MKL1Q969V6 931 aa14.14□□□□□ -0.15
PRPF39-203ENST00000477626 RBM28Q9NW13 759 aaKnown RBP14.14□□□□□ -0.15
PRPF39-203ENST00000477626 SAP30BPQ9UHR5 308 aaKnown RBP14.14□□□□□ -0.15
PRPF39-203ENST00000477626 PDE4BQ07343 736 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 SHROOM1Q2M3G4 852 aaPredicted RBP14.13□□□□□ -0.15
PRPF39-203ENST00000477626 KRT40Q6A162 431 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 LINC00301Q8NCQ3 95 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 PRMT6Q96LA8 375 aaPredicted RBP14.13□□□□□ -0.15
PRPF39-203ENST00000477626 GOLPH3LQ9H4A5 285 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 WNT7AO00755 349 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 TYW1BQ6NUM6 668 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 ZNF277Q9NRM2 450 aaPredicted RBP14.13□□□□□ -0.15
PRPF39-203ENST00000477626 MTMR4Q9NYA4 1195 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 PIM2Q9P1W9 311 aa14.13□□□□□ -0.15
PRPF39-203ENST00000477626 IARSP41252 1262 aaKnown RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 SPDYE2Q495Y8 402 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 FKBP1CQ5VVH2 108 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 BRAPQ7Z569 592 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 FERMT3Q86UX7 667 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 PPFIA3O75145 1194 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 CALM1P0DP23 149 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 CALM2P0DP24 149 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 CALM3P0DP25 149 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 IFIT1BQ5T764 474 aaKnown RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 SOGA3Q5TF21 947 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 STAG2Q8N3U4 1231 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 CEP95Q96GE4 821 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 USP40Q9NVE5 1235 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 COL11A1P12107 1806 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 ENTPD3O75355 529 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 USP5P45974 858 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 PFKFB3Q16875 520 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 MYSM1Q5VVJ2 828 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 CMTR1Q8N1G2 835 aaKnown RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 SWAP70Q9UH65 585 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 ISY1Q9ULR0 285 aaKnown RBP14.12□□□□□ -0.15
PRPF39-203ENST00000477626 ATP6V1DQ9Y5K8 247 aa14.12□□□□□ -0.15
PRPF39-203ENST00000477626 VPS37CA5D8V6 355 aaPredicted RBP14.11□□□□□ -0.15
PRPF39-203ENST00000477626 CDKL5O76039 1030 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 DEXIO95424 95 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 MBD3O95983 291 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 AKR1B1P15121 316 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 CCDC144CPQ8IYA2 1237 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 NLGN2Q8NFZ4 835 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 HPSEQ9Y251 543 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 CLIC4Q9Y696 253 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 BAZ2BQ9UIF8 2168 aaKnown RBP14.11□□□□□ -0.15
PRPF39-203ENST00000477626 CCDC69A6NI79 296 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
PRPF39-203ENST00000477626 FAM177A1Q8N128 213 aaPredicted RBP14.11□□□□□ -0.15
PRPF39-203ENST00000477626 TEPSINQ96N21 525 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 RIOX1Q9H6W3 641 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 ZNRF3Q9ULT6 936 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 POLR2AP24928 1970 aaKnown RBP14.11□□□□□ -0.15
PRPF39-203ENST00000477626 DAGLBQ8NCG7 672 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 ALG1Q9BT22 464 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 SPZ1Q9BXG8 430 aa14.11□□□□□ -0.15
PRPF39-203ENST00000477626 PPIP5K2O43314 1243 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 LIG1P18858 919 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 MMP14P50281 582 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 OXER1Q8TDS5 423 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 UBAC1Q9BSL1 405 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 LRRC37A2A6NM11 1700 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 CXCL9Q07325 125 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 RRP12Q5JTH9 1297 aaKnown RBP14.1□□□□□ -0.15
PRPF39-203ENST00000477626 C8orf76Q96K31 380 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 SCAND2PQ9GZW5 306 aaPredicted RBP14.1□□□□□ -0.15
PRPF39-203ENST00000477626 SHTN1A0MZ66 631 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 TBC1D12O60347 775 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 SART3Q15020 963 aaKnown RBP14.1□□□□□ -0.15
PRPF39-203ENST00000477626 IQCA1Q86XH1 822 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 KIAA0825Q8IV33 1275 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 STK11IPQ8N1F8 1099 aa14.1□□□□□ -0.15
PRPF39-203ENST00000477626 PDHBP11177 359 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 KRT85P78386 507 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 CCDC178Q5BJE1 867 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 C4orf32Q8N8J7 132 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 SH3GLB2Q9NR46 395 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 YEATS4O95619 227 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 XRCC6P12956 609 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRPF39-203ENST00000477626 CFAP100Q494V2 611 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 NOM1Q5C9Z4 860 aaKnown RBP14.09□□□□□ -0.15
PRPF39-203ENST00000477626 PNMA1Q8ND90 353 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 DHX36Q9H2U1 1008 aaKnown RBP14.09□□□□□ -0.15
PRPF39-203ENST00000477626 SERPINB13Q9UIV8 391 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 SYNPO2Q9UMS6 1093 aa14.09□□□□□ -0.15
PRPF39-203ENST00000477626 A0A1W2PQ27 194 aa14.08□□□□□ -0.15
PRPF39-203ENST00000477626 A0A1W2PQ64 194 aa14.08□□□□□ -0.15
PRPF39-203ENST00000477626 A0A1W2PQD8 194 aa14.08□□□□□ -0.15
PRPF39-203ENST00000477626 SLC3A2P08195 630 aaKnown RBP14.08□□□□□ -0.15
PRPF39-203ENST00000477626 SSRP1Q08945 709 aaKnown RBP14.08□□□□□ -0.15
PRPF39-203ENST00000477626 SCN4AP35499 1836 aa14.08□□□□□ -0.16
PRPF39-203ENST00000477626 EGFRP00533 1210 aa14.08□□□□□ -0.16
PRPF39-203ENST00000477626 DALRD3Q5D0E6 543 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms