RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PAGR1Q9BTK6 254 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
HDLBP-236ENST00000477477 PORCNQ9H237 461 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 ZBTB40Q9NUA8 1239 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
HDLBP-236ENST00000477477 PLXNB2O15031 1838 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 GOLIM4O00461 696 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 EVI5O60447 810 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 POLR3DP05423 398 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-236ENST00000477477 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
HDLBP-236ENST00000477477 VCAM1P19320 739 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP14P54578 494 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 GPR142Q7Z601 462 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 NECAB2Q7Z6G3 386 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
HDLBP-236ENST00000477477 ACER1Q8TDN7 264 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 USP6NLQ92738 828 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
HDLBP-236ENST00000477477 CABP5Q9NP86 173 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 ZNF532Q9HCE3 1301 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 MYH1P12882 1939 aa13.78□□□□□ -0.2
HDLBP-236ENST00000477477 TCRBV5S4A2TA0A5A2 114 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 RAB11FIP3O75154 756 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 CNMDO75829 334 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
HDLBP-236ENST00000477477 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-236ENST00000477477 RGS2P41220 211 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 MORN1Q5T089 497 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 CATSPERGQ6ZRH7 1159 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 PLEKHH3Q7Z736 793 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.21
HDLBP-236ENST00000477477 EDC3Q96F86 508 aaKnown RBP13.77□□□□□ -0.21
HDLBP-236ENST00000477477 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 OGDHLQ9ULD0 1010 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
HDLBP-236ENST00000477477 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-236ENST00000477477 EVX2Q03828 476 aa13.76□□□□□ -0.21
HDLBP-236ENST00000477477 LBX2Q6XYB7 198 aa13.76□□□□□ -0.21
HDLBP-236ENST00000477477 LCORLQ8N3X6 602 aa13.76□□□□□ -0.21
HDLBP-236ENST00000477477 SDR42E1Q8WUS8 393 aa13.76□□□□□ -0.21
HDLBP-236ENST00000477477 APBA2Q99767 749 aa13.76□□□□□ -0.21
HDLBP-236ENST00000477477 DCP1AQ9NPI6 582 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-236ENST00000477477 CCNA1P78396 465 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 CACNB2Q08289 660 aaPredicted RBP13.75□□□□□ -0.21
HDLBP-236ENST00000477477 MAP2K5Q13163 448 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 SEPT2Q15019 361 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 CCL14Q16627 93 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 NBPF3Q9H094 633 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 BCL11AQ9H165 835 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 BOLA2Q9H3K6 86 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
HDLBP-236ENST00000477477 RPAP3Q9H6T3 665 aaPredicted RBP13.75□□□□□ -0.21
HDLBP-236ENST00000477477 CWC22Q9HCG8 908 aaKnown RBP13.75□□□□□ -0.21
HDLBP-236ENST00000477477 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 NAV1Q8NEY1 1877 aa13.75□□□□□ -0.21
HDLBP-236ENST00000477477 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-236ENST00000477477 MPHOSPH10O00566 681 aaKnown RBP13.74□□□□□ -0.21
HDLBP-236ENST00000477477 GLRX3O76003 335 aaKnown RBP13.74□□□□□ -0.21
HDLBP-236ENST00000477477 CYP2D6P10635 497 aa13.74□□□□□ -0.21
HDLBP-236ENST00000477477 ATP5JP18859 108 aa13.74□□□□□ -0.21
HDLBP-236ENST00000477477 ADD2P35612 726 aa13.74□□□□□ -0.21
HDLBP-236ENST00000477477 C11orf49Q9H6J7 331 aa13.74□□□□□ -0.21
HDLBP-236ENST00000477477 ARMT1Q9H993 441 aa13.74□□□□□ -0.21
HDLBP-236ENST00000477477 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
HDLBP-236ENST00000477477 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
HDLBP-236ENST00000477477 SZT2Q5T011 3432 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 A0A1W2PRG0 241 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 PTPREP23469 700 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-236ENST00000477477 SLFNL1Q499Z3 407 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 C7orf61Q8IZ16 206 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 SLC44A5Q8NCS7 719 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 HAUS7Q99871 368 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 ATP8A2Q9NTI2 1148 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 SWAP70Q9UH65 585 aa13.73□□□□□ -0.21
HDLBP-236ENST00000477477 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 PRKAB2O43741 272 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 MBD4O95243 580 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 GRB14Q14449 540 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 WDR78Q5VTH9 848 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 TMEM179Q6ZVK1 233 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 DYNLL2Q96FJ2 89 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■□□□ 12.5
HDLBP-236ENST00000477477 STAP2Q9UGK3 403 aa13.72□□□□□ -0.21
HDLBP-236ENST00000477477 PFASO15067 1338 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 ALPK3Q96L96 1907 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 CHGBP05060 677 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 HOXC6P09630 235 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 UBE3CQ15386 1083 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms