RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 PRO3102Q9H379 93 aa22.98■■□□□ 1.27
GMDS-204ENST00000476972 DCP1AQ9NPI6 582 aaPredicted RBP22.98■■□□□ 1.27
GMDS-204ENST00000476972 ZBTB21Q9ULJ3 1066 aa22.98■■□□□ 1.27
GMDS-204ENST00000476972 EVI5O60447 810 aa22.97■■□□□ 1.27
GMDS-204ENST00000476972 POLR3DP05423 398 aaPredicted RBP22.97■■□□□ 1.27
GMDS-204ENST00000476972 PI4K2BQ8TCG2 481 aa22.97■■□□□ 1.27
GMDS-204ENST00000476972 PAWRQ96IZ0 340 aaKnown RBP22.97■■□□□ 1.27
GMDS-204ENST00000476972 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.97■■□□□ 1.27
GMDS-204ENST00000476972 MCM9Q9NXL9 1143 aa22.97■■□□□ 1.27
GMDS-204ENST00000476972 TMOD4Q9NZQ9 345 aa22.97■■□□□ 1.27
GMDS-204ENST00000476972 MORF4L1Q9UBU8 362 aa22.97■■□□□ 1.27
GMDS-204ENST00000476972 SUPT16HQ9Y5B9 1047 aaKnown RBP22.97■■□□□ 1.27
GMDS-204ENST00000476972 PRKAB2O43741 272 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 PEX10O60683 326 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 MX1P20591 662 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 HOXA7P31268 230 aaPredicted RBP22.96■■□□□ 1.27
GMDS-204ENST00000476972 IRX3P78415 501 aaPredicted RBP22.96■■□□□ 1.27
GMDS-204ENST00000476972 EVX2Q03828 476 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 ANKRD45Q5TZF3 282 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 TATDN1Q6P1N9 297 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 PUS7LQ9H0K6 701 aaKnown RBP22.96■■□□□ 1.27
GMDS-204ENST00000476972 GINM1Q9NU53 330 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 SALL3Q9BXA9 1300 aa22.96■■□□□ 1.27
GMDS-204ENST00000476972 C19orf81C9J6K1 198 aa22.95■■□□□ 1.26
GMDS-204ENST00000476972 USP17L10C9JJH3 530 aa22.95■■□□□ 1.26
GMDS-204ENST00000476972 ERC2O15083 957 aa22.95■■□□□ 1.26
GMDS-204ENST00000476972 GLRX3O76003 335 aaKnown RBP22.95■■□□□ 1.26
GMDS-204ENST00000476972 HMGCRP04035 888 aa22.95■■□□□ 1.26
GMDS-204ENST00000476972 TRIM32Q13049 653 aa22.95■■□□□ 1.26
GMDS-204ENST00000476972 ZBTB47Q9UFB7 747 aaPredicted RBP22.95■■□□□ 1.26
GMDS-204ENST00000476972 RPTORQ8N122 1335 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 GH2P01242 217 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 CYP2D6P10635 497 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 SHMT1P34896 483 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 GABPAQ06546 454 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 DIS3LQ8TF46 1054 aaKnown RBP22.94■■□□□ 1.26
GMDS-204ENST00000476972 TXNRD2Q9NNW7 524 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 ATP8A2Q9NTI2 1148 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 MYH8P13535 1937 aa22.94■■□□□ 1.26
GMDS-204ENST00000476972 CYP2B6P20813 491 aa22.93■■□□□ 1.26
GMDS-204ENST00000476972 HERVK_113P62684 666 aa22.93■■□□□ 1.26
GMDS-204ENST00000476972 NECAB2Q7Z6G3 386 aa22.93■■□□□ 1.26
GMDS-204ENST00000476972 GPRC5AQ8NFJ5 357 aa22.93■■□□□ 1.26
GMDS-204ENST00000476972 HMX1Q9NP08 348 aaPredicted RBP22.93■■□□□ 1.26
GMDS-204ENST00000476972 RBPJLQ9UBG7 517 aa22.93■■□□□ 1.26
GMDS-204ENST00000476972 Q3C1V9 767 aa22.92■■□□□ 1.26
GMDS-204ENST00000476972 CERKLQ49MI3 558 aaPredicted RBP22.92■■□□□ 1.26
GMDS-204ENST00000476972 APPBP2Q92624 585 aa22.92■■□□□ 1.26
GMDS-204ENST00000476972 EMILIN3Q9NT22 766 aa22.92■■□□□ 1.26
GMDS-204ENST00000476972 SLC4A4Q9Y6R1 1079 aa22.92■■□□□ 1.26
GMDS-204ENST00000476972 RNF113AO15541 343 aaKnown RBP22.91■■□□□ 1.26
GMDS-204ENST00000476972 TRIB2Q92519 343 aa22.91■■□□□ 1.26
GMDS-204ENST00000476972 OSBP2Q969R2 916 aa22.91■■□□□ 1.26
GMDS-204ENST00000476972 STAP2Q9UGK3 403 aa22.91■■□□□ 1.26
GMDS-204ENST00000476972 MGAMO43451 1857 aa22.9■■□□□ 1.26
GMDS-204ENST00000476972 ZFYP08048 801 aaPredicted RBP22.9■■□□□ 1.26
GMDS-204ENST00000476972 ABCB5Q2M3G0 1257 aa22.9■■□□□ 1.26
GMDS-204ENST00000476972 ANKLE1Q8NAG6 615 aa22.9■■□□□ 1.26
GMDS-204ENST00000476972 SLC44A5Q8NCS7 719 aa22.9■■□□□ 1.26
GMDS-204ENST00000476972 RWDD1Q9H446 243 aaPredicted RBP22.9■■□□□ 1.26
GMDS-204ENST00000476972 RAB3GAP1Q15042 981 aa22.89■■□□□ 1.25
GMDS-204ENST00000476972 POTEEQ6S8J3 1075 aa22.89■■□□□ 1.25
GMDS-204ENST00000476972 SMC5Q8IY18 1101 aa22.89■■□□□ 1.25
GMDS-204ENST00000476972 DDRGK1Q96HY6 314 aa22.89■■□□□ 1.25
GMDS-204ENST00000476972 STRBPQ96SI9 672 aaKnown RBP22.89■■□□□ 1.25
GMDS-204ENST00000476972 NUDT12Q9BQG2 462 aa22.89■■□□□ 1.25
GMDS-204ENST00000476972 CYP2D7A0A087X1C5 515 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 IGHDP01880 384 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 XRCC5P13010 732 aaKnown RBP22.88■■□□□ 1.25
GMDS-204ENST00000476972 MNX1P50219 401 aaPredicted RBP22.88■■□□□ 1.25
GMDS-204ENST00000476972 LRRFIP1Q32MZ4 808 aaKnown RBP22.88■■□□□ 1.25
GMDS-204ENST00000476972 USP17L2Q6R6M4 530 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 DYNLL2Q96FJ2 89 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 PAGR1Q9BTK6 254 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 FSD1Q9BTV5 496 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 LNPKQ9C0E8 428 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 NBPF3Q9H094 633 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 PORCNQ9H237 461 aa22.88■■□□□ 1.25
GMDS-204ENST00000476972 USP17L12C9JPN9 530 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 USP17L21D6R901 530 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 SMIM22K7EJ46 135 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 M0R2C6 588 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 PRKAR2AP13861 404 aaKnown RBP22.87■■□□□ 1.25
GMDS-204ENST00000476972 MAPK4P31152 587 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 PDE1AP54750 535 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 ERVK-9P63128 1117 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 ERVK-24P63145 666 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 MAP3K21Q5TCX8 1036 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 C12orf60Q5U649 245 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 CCAR1Q8IX12 1150 aaKnown RBP22.87■■□□□ 1.25
GMDS-204ENST00000476972 AMOTL1Q8IY63 956 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 CABP5Q9NP86 173 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 SWAP70Q9UH65 585 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 OGDHLQ9ULD0 1010 aa22.87■■□□□ 1.25
GMDS-204ENST00000476972 GPAA1O43292 621 aa22.86■■□□□ 1.25
GMDS-204ENST00000476972 GUCY1A2P33402 732 aa22.86■■□□□ 1.25
GMDS-204ENST00000476972 B4GALNT3Q6L9W6 998 aa22.86■■□□□ 1.25
GMDS-204ENST00000476972 SOCS4Q8WXH5 440 aa22.86■■□□□ 1.25
GMDS-204ENST00000476972 USP6NLQ92738 828 aa22.86■■□□□ 1.25
GMDS-204ENST00000476972 FEZ1Q99689 392 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms