RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 RAB3GAP1Q15042 981 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 MCMDC2Q4G0Z9 681 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 ANKRD23Q86SG2 305 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 WDR18Q9BV38 432 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 CFHR5Q9BXR6 569 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 NBPF3Q9H094 633 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 EMILIN3Q9NT22 766 aa14.89□□□□□ -0.03
APTX-220ENST00000476858 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 ASNSP08243 561 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 HSPD1P10809 573 aaKnown RBP14.88□□□□□ -0.03
APTX-220ENST00000476858 CTGFP29279 349 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 GIMAP6Q6P9H5 292 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 POTEEQ6S8J3 1075 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 ARHGAP39Q9C0H5 1083 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 ARPP21Q9UBL0 812 aaPredicted RBP14.88□□□□□ -0.03
APTX-220ENST00000476858 CPA4Q9UI42 421 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 CCDC171Q6TFL3 1326 aa14.88□□□□□ -0.03
APTX-220ENST00000476858 CENPBP07199 599 aaPredicted RBP14.87□□□□□ -0.03
APTX-220ENST00000476858 GNAT2P19087 354 aa14.87□□□□□ -0.03
APTX-220ENST00000476858 BACE1P56817 501 aa14.87□□□□□ -0.03
APTX-220ENST00000476858 PPARAQ07869 468 aa14.87□□□□□ -0.03
APTX-220ENST00000476858 LRRFIP1Q32MZ4 808 aaKnown RBP14.87□□□□□ -0.03
APTX-220ENST00000476858 SH3D19Q5HYK7 790 aa14.87□□□□□ -0.03
APTX-220ENST00000476858 CD99L2Q8TCZ2 262 aa14.87□□□□□ -0.03
APTX-220ENST00000476858 GREB1LQ9C091 1923 aaPredicted RBP14.87□□□□□ -0.03
APTX-220ENST00000476858 MYH8P13535 1937 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 ALDH1A1P00352 501 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 FGAP02671 866 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 CHMLP26374 656 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 HAND2P61296 217 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 NAPBQ9H115 298 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 DIAPH3Q9NSV4 1193 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 SWAP70Q9UH65 585 aa14.86□□□□□ -0.03
APTX-220ENST00000476858 USP17L10C9JJH3 530 aa14.85□□□□□ -0.03
APTX-220ENST00000476858 NEFLP07196 543 aa14.85□□□□□ -0.03
APTX-220ENST00000476858 FAM47AQ5JRC9 791 aa14.85□□□□□ -0.03
APTX-220ENST00000476858 C17orf99Q6UX52 265 aa14.85□□□□□ -0.03
APTX-220ENST00000476858 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
APTX-220ENST00000476858 AGTPBP1Q9UPW5 1226 aa14.85□□□□□ -0.03
APTX-220ENST00000476858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.85□□□□□ -0.03
APTX-220ENST00000476858 HTTP42858 3142 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 TLR2O60603 784 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 FKTNO75072 461 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 PTH1RQ03431 593 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 ALX1Q15699 326 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 OTUD7BQ6GQQ9 843 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 FASTKD5Q7L8L6 764 aaKnown RBP14.84□□□□□ -0.03
APTX-220ENST00000476858 TBC1D10CQ8IV04 446 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 TNS4Q8IZW8 715 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 MCOLN1Q9GZU1 580 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 ASCC2Q9H1I8 757 aaPredicted RBP14.84□□□□□ -0.03
APTX-220ENST00000476858 AS3MTQ9HBK9 375 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 ZFYVE28Q9HCC9 887 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 CABP5Q9NP86 173 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 TAF6LQ9Y6J9 622 aa14.84□□□□□ -0.03
APTX-220ENST00000476858 IGKV6D-41A0A0C4DH26 115 aa14.83□□□□□ -0.04
APTX-220ENST00000476858 NMT2O60551 498 aa14.83□□□□□ -0.04
APTX-220ENST00000476858 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
APTX-220ENST00000476858 TMEM179Q6ZVK1 233 aa14.83□□□□□ -0.04
APTX-220ENST00000476858 AMOTL1Q8IY63 956 aa14.83□□□□□ -0.04
APTX-220ENST00000476858 PROCA1Q8NCQ7 364 aaPredicted RBP14.83□□□□□ -0.04
APTX-220ENST00000476858 P2RX7Q99572 595 aaKnown RBP14.83□□□□□ -0.04
APTX-220ENST00000476858 GINM1Q9NU53 330 aa14.83□□□□□ -0.04
APTX-220ENST00000476858 BCRP11274 1271 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 VCAM1P19320 739 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 SP3Q02447 781 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 ICA1Q05084 483 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 RASGRP2Q7LDG7 609 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 SPICE1Q8N0Z3 855 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 FEZ1Q99689 392 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 KIAA1683Q9H0B3 1180 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 MKNK2Q9HBH9 465 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 ZCCHC17Q9NP64 241 aaKnown RBP14.82□□□□□ -0.04
APTX-220ENST00000476858 ANAPC4Q9UJX5 808 aa14.82□□□□□ -0.04
APTX-220ENST00000476858 NOM1Q5C9Z4 860 aaKnown RBP14.81□□□□□ -0.04
APTX-220ENST00000476858 USP17L2Q6R6M4 530 aa14.81□□□□□ -0.04
APTX-220ENST00000476858 C12orf42Q96LP6 360 aa14.81□□□□□ -0.04
APTX-220ENST00000476858 TXNRD2Q9NNW7 524 aa14.81□□□□□ -0.04
APTX-220ENST00000476858 IL17RBQ9NRM6 502 aa14.81□□□□□ -0.04
APTX-220ENST00000476858 NEDD4P46934 1319 aa14.81□□□□□ -0.04
APTX-220ENST00000476858 C19orf81C9J6K1 198 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 SGSM2O43147 1006 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 TFAP4Q01664 338 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 COL9A3Q14050 684 aaPredicted RBP14.8□□□□□ -0.04
APTX-220ENST00000476858 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 CTU1Q7Z7A3 348 aaKnown RBP14.8□□□□□ -0.04
APTX-220ENST00000476858 TICAM2Q86XR7 235 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 ANKRD13CQ8N6S4 541 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 CEP95Q96GE4 821 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 TRIM47Q96LD4 638 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 CCDC17Q96LX7 622 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 PARK7Q99497 189 aaKnown RBP14.8□□□□□ -0.04
APTX-220ENST00000476858 NUP88Q99567 741 aaPredicted RBP14.8□□□□□ -0.04
APTX-220ENST00000476858 TBC1D2Q9BYX2 928 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 PPP4R2Q9NY27 417 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 TMOD4Q9NZQ9 345 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms