RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 LRP10Q7Z4F1 713 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.6□□□□□ -0.874e-6■■■□□ 14.8
MACF1-216ENST00000476350 TUBE1Q9UJT0 475 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 EYA2O00167 538 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.87
MACF1-216ENST00000476350 ANTXR2P58335 489 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 SHC4Q6S5L8 630 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 GPR161Q8N6U8 529 aaKnown RBP9.6□□□□□ -0.87
MACF1-216ENST00000476350 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 CLIC6Q96NY7 704 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 TMEM51Q9NW97 253 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 KAT6BQ8WYB5 2073 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 PES1O00541 588 aaKnown RBP9.6□□□□□ -0.87
MACF1-216ENST00000476350 ARHGAP6O43182 974 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 ZBED4O75132 1171 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 SREBF2Q12772 1141 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 HSP90AA4PQ58FG1 418 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 KRBA2Q6ZNG9 492 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 EPC1Q9H2F5 836 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 FANCLQ9NW38 375 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 MRFAP1Q9Y605 127 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 MYO3BQ8WXR4 1341 aa9.6□□□□□ -0.87
MACF1-216ENST00000476350 CIAO1O76071 339 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 RXRAP19793 462 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 HNRNPH2P55795 449 aaKnown RBP9.59□□□□□ -0.87
MACF1-216ENST00000476350 CCDC117Q8IWD4 279 aaPredicted RBP9.59□□□□□ -0.87
MACF1-216ENST00000476350 NOC3LQ8WTT2 800 aaKnown RBP9.59□□□□□ -0.87
MACF1-216ENST00000476350 MAP3K14Q99558 947 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 DACH1Q9UI36 760 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 CPDO75976 1380 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 H7C1W4 665 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 GPS2Q13227 327 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 GOLGA1Q92805 767 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 DDX17Q92841 729 aaKnown RBP9.59□□□□□ -0.87
MACF1-216ENST00000476350 TRERF1Q96PN7 1200 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 FGAP02671 866 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 CC2D1AQ6P1N0 951 aaPredicted RBP9.59□□□□□ -0.87
MACF1-216ENST00000476350 COA7Q96BR5 231 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 HACL1Q9UJ83 578 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 NR2E3Q9Y5X4 410 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 IPO7O95373 1038 aaKnown RBP9.59□□□□□ -0.87
MACF1-216ENST00000476350 KRT40Q6A162 431 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 METTL16Q86W50 562 aaKnown RBP9.59□□□□□ -0.87
MACF1-216ENST00000476350 SMARCE1Q969G3 411 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 XAGE2Q96GT9 111 aa9.59□□□□□ -0.87
MACF1-216ENST00000476350 TRPM3Q9HCF6 1732 aaPredicted RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 CUTAO60888 179 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 NEBLO76041 1014 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 ZFYP08048 801 aaPredicted RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 EP400NLQ6ZTU2 488 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 PUS3Q9BZE2 481 aaKnown RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 PUS7LQ9H0K6 701 aaKnown RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 MEGF6O75095 1541 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 WDR19Q8NEZ3 1342 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 SOCS7O14512 581 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 PDE8AO60658 829 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 GNAQP50148 359 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 ADKP55263 362 aaKnown RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 TSPYL1Q9H0U9 437 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 KCNH3Q9ULD8 1083 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 FANCGO15287 622 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 ADORA1P30542 326 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 AIFM3Q96NN9 605 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 HPSEQ9Y251 543 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 MINDY4BA8MYZ0 360 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 SMC1AQ14683 1233 aaKnown RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 KARSQ15046 597 aaKnown RBP9.58□□□□□ -0.88
MACF1-216ENST00000476350 LONRF3Q496Y0 759 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 SPECC1Q5M775 1068 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 WDR24Q96S15 920 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 MAN1B1Q9UKM7 699 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 SASH3O75995 380 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 PHKBQ93100 1093 aa9.58□□□□□ -0.88
MACF1-216ENST00000476350 SH2B2O14492 632 aaPredicted RBP9.57□□□□□ -0.88
MACF1-216ENST00000476350 TBC1D8O95759 1140 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 HIBADHP31937 336 aaKnown RBP9.57□□□□□ -0.88
MACF1-216ENST00000476350 SSRP1Q08945 709 aaKnown RBP9.57□□□□□ -0.88
MACF1-216ENST00000476350 GOLGA8AA7E2F4 631 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 CNGA1P29973 690 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 CYB5R4Q7L1T6 521 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 SMC1BQ8NDV3 1235 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 KIFC2Q96AC6 838 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 PARD6BQ9BYG5 372 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 ZAP70P43403 619 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 TBX2Q13207 712 aaPredicted RBP9.57□□□□□ -0.88
MACF1-216ENST00000476350 TEKT1Q969V4 418 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 ARFGAP3Q9NP61 516 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 CWC15Q9P013 229 aaKnown RBP9.57□□□□□ -0.88
MACF1-216ENST00000476350 PPEF1O14829 653 aaPredicted RBP9.57□□□□□ -0.88
MACF1-216ENST00000476350 FOXP2O15409 715 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 GPAA1O43292 621 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 PRR29P0C7W0 189 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 POTEJP0CG39 1038 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
MACF1-216ENST00000476350 POSTNQ15063 836 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 PTPAQ15257 358 aa9.57□□□□□ -0.88
MACF1-216ENST00000476350 TMEM139Q8IV31 216 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms