RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
LSG1-207ENST00000475763 RAD17O75943 681 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 SCNN1DP51172 638 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.29
LSG1-207ENST00000475763 HIC1Q14526 733 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 C12orf60Q5U649 245 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 Q6ZUG5 572 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 TMEM87BQ96K49 555 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 PRR14Q9BWN1 585 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 MCM9Q9NXL9 1143 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 ADAMTSL1Q8N6G6 1762 aa13.21□□□□□ -0.29
LSG1-207ENST00000475763 FLT1P17948 1338 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 GPR37O15354 613 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 PRC1O43663 620 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 ORC4O43929 436 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 SLC10A3P09131 477 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
LSG1-207ENST00000475763 EVCP57679 992 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 FGD1P98174 961 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 CTDSPL2Q05D32 466 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 CXCL9Q07325 125 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 MTMR14Q8NCE2 650 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
LSG1-207ENST00000475763 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
LSG1-207ENST00000475763 NEDD4P46934 1319 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 SBF1O95248 1867 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 B4E1Z4 1266 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 FZD9O00144 591 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
LSG1-207ENST00000475763 LMNB1P20700 586 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 EIF6P56537 245 aaKnown RBP13.19□□□□□ -0.3
LSG1-207ENST00000475763 RASSF7Q02833 373 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 PDE4BQ07343 736 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 COL9A3Q14050 684 aaPredicted RBP13.19□□□□□ -0.3
LSG1-207ENST00000475763 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 CDC42EP5Q6NZY7 148 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 MAPKAPK5Q8IW41 473 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 ESR2Q92731 530 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 IDI2Q9BXS1 227 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
LSG1-207ENST00000475763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
LSG1-207ENST00000475763 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
LSG1-207ENST00000475763 CFHP08603 1231 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 USP17L8P0C7I0 530 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 DDIT3P35638 169 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.3
LSG1-207ENST00000475763 ANTXR2P58335 489 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
LSG1-207ENST00000475763 CFAP100Q494V2 611 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
LSG1-207ENST00000475763 TTC6Q86TZ1 520 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 BRF1Q92994 677 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 ZNF274Q96GC6 653 aaPredicted RBP13.18□□□□□ -0.3
LSG1-207ENST00000475763 TCEANC2Q96MN5 208 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
LSG1-207ENST00000475763 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
LSG1-207ENST00000475763 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.18□□□□□ -0.3
LSG1-207ENST00000475763 GOLGB1Q14789 3259 aaKnown RBP13.18□□□□□ -0.3
LSG1-207ENST00000475763 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
LSG1-207ENST00000475763 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 KDM4AO75164 1064 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 OATP04181 439 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 LIFRP42702 1097 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 ME3Q16798 604 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 CYB5R4Q7L1T6 521 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 DPF2Q92785 391 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 ZSWIM5Q9P217 1185 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
LSG1-207ENST00000475763 SH2B2O14492 632 aaPredicted RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 PFKFB2O60825 505 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 ENTPD3O75355 529 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 CYP2D6P10635 497 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 PRELPP51888 382 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 ZNF280AP59817 542 aaPredicted RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 DLGAP5Q15398 846 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 RRP12Q5JTH9 1297 aaKnown RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 Q6ZNB5 142 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 C16orf86Q6ZW13 317 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 IGDCC4Q8TDY8 1250 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 LRRC2Q9BYS8 371 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 DHX36Q9H2U1 1008 aaKnown RBP13.16□□□□□ -0.3
LSG1-207ENST00000475763 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 TMOD2Q9NZR1 351 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 CHMP5Q9NZZ3 219 aa13.16□□□□□ -0.3
LSG1-207ENST00000475763 ERICH2A1L162 156 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
LSG1-207ENST00000475763 TLL1O43897 1013 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
LSG1-207ENST00000475763 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms