RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 KRT23Q9C075 422 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 NAPBQ9H115 298 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 VEZTQ9HBM0 779 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 ZFYVE28Q9HCC9 887 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 CWC22Q9HCG8 908 aaKnown RBP8.3□□□□□ -1.08
SHQ1-207ENST00000475558 SLC4A4Q9Y6R1 1079 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 CENPFP49454 3210 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 SSC5DA1L4H1 1573 aa8.3□□□□□ -1.08
SHQ1-207ENST00000475558 F8W031 263 aaPredicted RBP8.29□□□□□ -1.08
SHQ1-207ENST00000475558 GTF2A2P52657 109 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 LSM11P83369 360 aaKnown RBP eCLIP8.29□□□□□ -1.08
SHQ1-207ENST00000475558 PTH1RQ03431 593 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 TAF1CQ15572 869 aaPredicted RBP8.29□□□□□ -1.08
SHQ1-207ENST00000475558 SBK1Q52WX2 424 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 PI16Q6UXB8 463 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 DHX32Q7L7V1 743 aaKnown RBP8.29□□□□□ -1.08
SHQ1-207ENST00000475558 IFNL3Q8IZI9 196 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 NCOA7Q8NI08 942 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 TEKT1Q969V4 418 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 OPTNQ96CV9 577 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 SEC62Q99442 399 aaKnown RBP8.29□□□□□ -1.08
SHQ1-207ENST00000475558 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 ANAPC4Q9UJX5 808 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 SERPINA10Q9UK55 444 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 IQSEC3Q9UPP2 1182 aaPredicted RBP8.29□□□□□ -1.08
SHQ1-207ENST00000475558 PCDHAC2Q9Y5I4 1007 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 SNX14Q9Y5W7 946 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 NDUFB9Q9Y6M9 179 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 TRIOBPQ9H2D6 2365 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 WDR19Q8NEZ3 1342 aa8.29□□□□□ -1.08
SHQ1-207ENST00000475558 CCL15-CCL14A0A0B4J2E2 113 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 M0R2C6 588 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 MBD4O95243 580 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 GNRH1P01148 92 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 HSP90AA1P07900 732 aaKnown RBP8.28□□□□□ -1.08
SHQ1-207ENST00000475558 MAP3K9P80192 1104 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 KIF22Q14807 665 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 PPP2R5BQ15173 497 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 CCL15Q16663 113 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 PPP4R3BQ5MIZ7 849 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 RALYLQ86SE5 291 aaKnown RBP8.28□□□□□ -1.08
SHQ1-207ENST00000475558 ZNF589Q86UQ0 364 aaPredicted RBP8.28□□□□□ -1.08
SHQ1-207ENST00000475558 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 BRI3BPQ8WY22 251 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 INTS4Q96HW7 963 aaKnown RBP8.28□□□□□ -1.08
SHQ1-207ENST00000475558 KIF2CQ99661 725 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 RIOK1Q9BRS2 568 aaKnown RBP8.28□□□□□ -1.08
SHQ1-207ENST00000475558 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
SHQ1-207ENST00000475558 PDRG1Q9NUG6 133 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 LIMCH1Q9UPQ0 1083 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 PTCH2Q9Y6C5 1203 aa8.28□□□□□ -1.08
SHQ1-207ENST00000475558 GSG1L2A8MUP6 293 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 H0YGN5 161 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 DHX16O60231 1041 aaKnown RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 CYP21A2P08686 494 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 NUDT7P0C024 238 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 PRDX5P30044 214 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 MCM5P33992 734 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 USP5P45974 858 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 TDO2P48775 406 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 TNNI2P48788 182 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 PRMT2P55345 433 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 FGD1P98174 961 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 CAP1Q01518 475 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 PDE4BQ07343 736 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 SART3Q15020 963 aaKnown RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 TMEM87BQ96K49 555 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 ZDHHC15Q96MV8 337 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 JAKMIP1Q96N16 626 aaKnown RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 DHX36Q9H2U1 1008 aaKnown RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 ARMT1Q9H993 441 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 ZCCHC17Q9NP64 241 aaKnown RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 ARPP21Q9UBL0 812 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 ZNF70Q9UC06 446 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 TTF2Q9UNY4 1162 aaKnown RBP8.27□□□□□ -1.09
SHQ1-207ENST00000475558 CSADQ9Y600 493 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 MROH7-TTC4A0A0A0MT08 1334 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 GAKO14976 1311 aa8.27□□□□□ -1.09
SHQ1-207ENST00000475558 ERICH2A1L162 156 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 C2orf72A6NCS6 295 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 STK25O00506 426 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 TLR2O60603 784 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 FGRP09769 529 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 CETPP11597 493 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 CASTP20810 708 aaKnown RBP8.26□□□□□ -1.09
SHQ1-207ENST00000475558 RPS6KB1P23443 525 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 VGLL4Q14135 290 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 AKNAD1Q5T1N1 836 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 ESR2Q92731 530 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 TEPSINQ96N21 525 aa8.26□□□□□ -1.09
SHQ1-207ENST00000475558 TDRD3Q9H7E2 651 aaKnown RBP8.26□□□□□ -1.09
SHQ1-207ENST00000475558 AATFQ9NY61 560 aaKnown RBP eCLIP8.26□□□□□ -1.09
SHQ1-207ENST00000475558 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-207ENST00000475558 BRCA2P51587 3418 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms