RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PRO3102Q9H379 93 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 BOLA2Q9H3K6 86 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 LAMA3Q16787 3333 aa8.53□□□□□ -1.04
HDAC3-207ENST00000475549 SIPA1L1O43166 1804 aa8.52□□□□□ -1.04
HDAC3-207ENST00000475549 SMARCA5O60264 1052 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 RAB11FIP3O75154 756 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 FARP2O94887 1054 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 TFRCP02786 760 aaKnown RBP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 IFIT2P09913 472 aaKnown RBP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 ATP5JP18859 108 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 VCAM1P19320 739 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 CYP2B6P20813 491 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 ERVK-9P63128 1117 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 ERVK-24P63145 666 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 SEPT2Q15019 361 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 ZYXQ15942 572 aaKnown RBP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 CCL14Q16627 93 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 ABCB5Q2M3G0 1257 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 MORN1Q5T089 497 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 CATSPERGQ6ZRH7 1159 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 GPR142Q7Z601 462 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 DYNLL2Q96FJ2 89 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 PAWRQ96IZ0 340 aaKnown RBP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 HAUS7Q99871 368 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 KIAA1683Q9H0B3 1180 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 ARMT1Q9H993 441 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 MCM9Q9NXL9 1143 aa8.52□□□□□ -1.05
HDAC3-207ENST00000475549 RBBP6Q7Z6E9 1792 aaKnown RBP8.52□□□□□ -1.05
HDAC3-207ENST00000475549 DOCK1Q14185 1865 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 AK9Q5TCS8 1911 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 CYP2D7A0A087X1C5 515 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 HMMRO75330 724 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 HMGCRP04035 888 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 POLR3DP05423 398 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-207ENST00000475549 XRCC5P13010 732 aaKnown RBP8.51□□□□□ -1.05
HDAC3-207ENST00000475549 ADD2P35612 726 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 PAGR1Q9BTK6 254 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 CRNKL1Q9BZJ0 848 aaKnown RBP8.51□□□□□ -1.05
HDAC3-207ENST00000475549 PUS7LQ9H0K6 701 aaKnown RBP8.51□□□□□ -1.05
HDAC3-207ENST00000475549 PAG1Q9NWQ8 432 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 BTBD7Q9P203 1132 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 PCDH10Q9P2E7 1040 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
HDAC3-207ENST00000475549 RABGAP1Q9Y3P9 1069 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 RPTORQ8N122 1335 aa8.51□□□□□ -1.05
HDAC3-207ENST00000475549 SPDYE16A6NNV3 312 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-207ENST00000475549 MBD4O95243 580 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 IGHA2P01877 340 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 MAPK4P31152 587 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 CACNB2Q08289 660 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-207ENST00000475549 LHX8Q68G74 356 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 LBX2Q6XYB7 198 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 CLEC10AQ8IUN9 316 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 FEZ1Q99689 392 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 RPAP3Q9H6T3 665 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-207ENST00000475549 DCTPP1Q9H773 170 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 FLRT1Q9NZU1 646 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 OGDHLQ9ULD0 1010 aa8.5□□□□□ -1.05
HDAC3-207ENST00000475549 PTPRFP10586 1907 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 LOC285556D6RIA3 1793 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L12C9JPN9 530 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 USP17L21D6R901 530 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 PRKAR2AP13861 404 aaKnown RBP8.49□□□□□ -1.05
HDAC3-207ENST00000475549 AKR1B1P15121 316 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 CCND3P30281 292 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-207ENST00000475549 USP14P54578 494 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 UBE3CQ15386 1083 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 C12orf60Q5U649 245 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 CTR9Q6PD62 1173 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 PLEKHH3Q7Z736 793 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 HTATIP2Q9BUP3 242 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 LRRCC1Q9C099 1032 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 HMX1Q9NP08 348 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-207ENST00000475549 CABP5Q9NP86 173 aa8.49□□□□□ -1.05
HDAC3-207ENST00000475549 CEP290O15078 2479 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 MPHOSPH10O00566 681 aaKnown RBP8.48□□□□□ -1.05
HDAC3-207ENST00000475549 EVI5O60447 810 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 PTPREP23469 700 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 RGS2P41220 211 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 CDK8P49336 464 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 COG2Q14746 738 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 TSHZ3Q63HK5 1081 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 NPLOC4Q8TAT6 608 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 GTF3C2Q8WUA4 911 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-207ENST00000475549 SOCS4Q8WXH5 440 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 STRBPQ96SI9 672 aaKnown RBP8.48□□□□□ -1.05
HDAC3-207ENST00000475549 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms