RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 DAGLAQ9Y4D2 1042 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 CDK5RAP2Q96SN8 1893 aa17.72■□□□□ 0.43
RPUSD3-215ENST00000475470 H0YIN7 160 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 NR5A1Q13285 461 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 RGPD3A6NKT7 1758 aaPredicted RBP17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 RGPD4Q7Z3J3 1758 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 USP17L3A6NCW0 530 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 USP17L4A6NCW7 530 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 ADCY5O95622 1261 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 USP17L1Q7RTZ2 530 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 PNMA1Q8ND90 353 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 ANKS1AQ92625 1134 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 TCP11L1Q9NUJ3 509 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 CNTNAP5Q8WYK1 1306 aa17.71■□□□□ 0.43
RPUSD3-215ENST00000475470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 RASA1P20936 1047 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 OXER1Q8TDS5 423 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 CBX8Q9HC52 389 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 TTF2Q9UNY4 1162 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 CAVIN2O95810 425 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 PTMAP06454 111 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 PFKFB1P16118 471 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 KRT2P35908 639 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 CDK8P49336 464 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 TOB1P50616 345 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 C16orf86Q6ZW13 317 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 LUZP1Q86V48 1076 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 ZSCAN30Q86W11 494 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 CERS5Q8N5B7 392 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 DNAJC25Q9H1X3 360 aa17.7■□□□□ 0.42
RPUSD3-215ENST00000475470 ZNF202O95125 648 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 ZNF165P49910 485 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 STX1AQ16623 288 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 BRMS1Q9HCU9 246 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 CUTAO60888 179 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 POTEAQ6S8J7 498 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 CABP5Q9NP86 173 aa17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 RGS17Q9UGC6 210 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-215ENST00000475470 MXD3Q9BW11 206 aa17.68■□□□□ 0.42
RPUSD3-215ENST00000475470 STX8Q9UNK0 236 aa17.68■□□□□ 0.42
RPUSD3-215ENST00000475470 SHC4Q6S5L8 630 aa17.68■□□□□ 0.42
RPUSD3-215ENST00000475470 KRI1Q8N9T8 703 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-215ENST00000475470 CLIC6Q96NY7 704 aa17.68■□□□□ 0.42
RPUSD3-215ENST00000475470 CEP131Q9UPN4 1083 aa17.68■□□□□ 0.42
RPUSD3-215ENST00000475470 MYH1P12882 1939 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 SCG2P13521 617 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 ATP2B1P20020 1258 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 SYKP43405 635 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 PICALMQ13492 652 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 PIBF1Q8WXW3 757 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 DDX60LQ5H9U9 1706 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 GNAQP50148 359 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 SCNN1DP51172 638 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 PODNQ7Z5L7 613 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 ERCC4Q92889 916 aaPredicted RBP17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 TMEM47Q9BQJ4 181 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 ANO10Q9NW15 660 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 PCDHB6Q9Y5E3 794 aa17.67■□□□□ 0.42
RPUSD3-215ENST00000475470 CLCN1P35523 988 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 GRM4Q14833 912 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 PFKFB3Q16875 520 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 RESP18Q5W5W9 173 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 NEDD1Q8NHV4 660 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 CHRNA5P30532 468 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 ZRSR1Q15695 479 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 USP40Q9NVE5 1235 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 KIAA1468Q9P260 1216 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 HPSEQ9Y251 543 aa17.66■□□□□ 0.42
RPUSD3-215ENST00000475470 AP5Z1O43299 807 aa17.65■□□□□ 0.42
RPUSD3-215ENST00000475470 NLRP5P59047 1200 aa17.65■□□□□ 0.42
RPUSD3-215ENST00000475470 STAG2Q8N3U4 1231 aa17.65■□□□□ 0.42
RPUSD3-215ENST00000475470 TEKT1Q969V4 418 aa17.65■□□□□ 0.42
RPUSD3-215ENST00000475470 TIGD1Q96MW7 591 aa17.65■□□□□ 0.42
RPUSD3-215ENST00000475470 FOCADQ5VW36 1801 aa17.65■□□□□ 0.42
RPUSD3-215ENST00000475470 SNED1Q8TER0 1413 aa17.65■□□□□ 0.42
RPUSD3-215ENST00000475470 HHIPL2Q6UWX4 724 aa17.64■□□□□ 0.42
RPUSD3-215ENST00000475470 C11orf57Q6ZUT1 292 aaPredicted RBP17.64■□□□□ 0.42
RPUSD3-215ENST00000475470 MAD2L2Q9UI95 211 aa17.64■□□□□ 0.42
RPUSD3-215ENST00000475470 QSER1Q2KHR3 1735 aa17.64■□□□□ 0.41
RPUSD3-215ENST00000475470 FAM237AA0A1B0GTK4 181 aa17.64■□□□□ 0.41
RPUSD3-215ENST00000475470 TRIM75PA6NK02 468 aa17.64■□□□□ 0.41
RPUSD3-215ENST00000475470 BAZ2BQ9UIF8 2168 aaKnown RBP17.64■□□□□ 0.41
RPUSD3-215ENST00000475470 FAM205CA6NFA0 338 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms