RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 MICALL1Q8N3F8 863 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 FRAT1Q92837 279 aaPredicted RBP8.35□□□□□ -1.07
LSAMP-204ENST00000475403 FERMT2Q96AC1 680 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 KAZALD1Q96I82 304 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 FEZ1Q99689 392 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 NOL10Q9BSC4 688 aaKnown RBP8.35□□□□□ -1.07
LSAMP-204ENST00000475403 PRDM12Q9H4Q4 367 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 FLRT1Q9NZU1 646 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 RBPJLQ9UBG7 517 aa8.35□□□□□ -1.07
LSAMP-204ENST00000475403 HERC5Q9UII4 1024 aaKnown RBP8.35□□□□□ -1.07
LSAMP-204ENST00000475403 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
LSAMP-204ENST00000475403 IL16Q14005 1332 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 MYO9BQ13459 2157 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 EYA2O00167 538 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 APBB1O00213 710 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 VAMP4O75379 141 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 PDE4AP27815 886 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 ADCYAP1R1P41586 468 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 TLE2Q04725 743 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 SNX17Q15036 470 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 SKIV2LQ15477 1246 aaKnown RBP8.34□□□□□ -1.07
LSAMP-204ENST00000475403 AAK1Q2M2I8 961 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 DPP9Q86TI2 863 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 WWC1Q8IX03 1113 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 CRACR2BQ8N4Y2 399 aaPredicted RBP8.34□□□□□ -1.07
LSAMP-204ENST00000475403 ANKRD44Q8N8A2 993 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 NECAB3Q96P71 396 aaPredicted RBP8.34□□□□□ -1.07
LSAMP-204ENST00000475403 WDR18Q9BV38 432 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 SIL1Q9H173 461 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 PRKRIP1Q9H875 184 aaPredicted RBP8.34□□□□□ -1.07
LSAMP-204ENST00000475403 CEP126Q9P2H0 1117 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 RABGAP1Q9Y3P9 1069 aa8.34□□□□□ -1.07
LSAMP-204ENST00000475403 SEPT4O43236 478 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 CYBAP13498 195 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 PTPREP23469 700 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 CLCN1P35523 988 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 PHKA1P46020 1223 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 GSTO1P78417 241 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 EXOSC9Q06265 439 aaKnown RBP8.33□□□□□ -1.08
LSAMP-204ENST00000475403 HSP90AA2PQ14568 343 aaPredicted RBP8.33□□□□□ -1.08
LSAMP-204ENST00000475403 ZYXQ15942 572 aaKnown RBP8.33□□□□□ -1.08
LSAMP-204ENST00000475403 CCDC27Q2M243 656 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 TMEM31Q5JXX7 168 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 TEX11Q8IYF3 940 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 TMEM39AQ9NV64 488 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 SLC5A4Q9NY91 659 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 PI4KBQ9UBF8 816 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 MSRAQ9UJ68 235 aa8.33□□□□□ -1.08
LSAMP-204ENST00000475403 TCF20Q9UGU0 1960 aaKnown RBP8.33□□□□□ -1.08
LSAMP-204ENST00000475403 GPR75-ASB3A0A0A6YYF3 556 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 NPM3O75607 178 aaKnown RBP8.32□□□□□ -1.08
LSAMP-204ENST00000475403 GDF11O95390 407 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 MAP4K4O95819 1239 aaPredicted RBP8.32□□□□□ -1.08
LSAMP-204ENST00000475403 LDHCP07864 332 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 EPHB4P54760 987 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 MECOMQ03112 1051 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 GRB14Q14449 540 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 LRRC41Q15345 812 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 C1orf53Q5VUE5 145 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
LSAMP-204ENST00000475403 TRPV1Q8NER1 839 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 NPLOC4Q8TAT6 608 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 FAM163AQ96GL9 167 aaPredicted RBP8.32□□□□□ -1.08
LSAMP-204ENST00000475403 LRFN3Q9BTN0 628 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 PBX4Q9BYU1 374 aa8.32□□□□□ -1.08
LSAMP-204ENST00000475403 CXXC1Q9P0U4 656 aaPredicted RBP8.32□□□□□ -1.08
LSAMP-204ENST00000475403 DCDC2CA8MYV0 355 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 KIAA0355O15063 1070 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 HSP90AA1P07900 732 aaKnown RBP8.31□□□□□ -1.08
LSAMP-204ENST00000475403 HOXC6P09630 235 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 RARBP10826 455 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 ITGB8P26012 769 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 PBX2P40425 430 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 RHBDL3P58872 404 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.08
LSAMP-204ENST00000475403 RASGRF1Q13972 1273 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
LSAMP-204ENST00000475403 RAB30Q15771 203 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 FAM47AQ5JRC9 791 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 OLFML2BQ68BL8 750 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 CCDC102BQ68D86 513 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 RNF180Q86T96 592 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 MTIF3Q9H2K0 278 aaKnown RBP8.31□□□□□ -1.08
LSAMP-204ENST00000475403 DHX36Q9H2U1 1008 aaKnown RBP8.31□□□□□ -1.08
LSAMP-204ENST00000475403 XPNPEP3Q9NQH7 507 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 GINM1Q9NU53 330 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 RAI14Q9P0K7 980 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 ZBTB21Q9ULJ3 1066 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 PLXNA1Q9UIW2 1896 aa8.31□□□□□ -1.08
LSAMP-204ENST00000475403 PDS5AQ29RF7 1337 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms