RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 USP17L18D6R9N7 530 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 USP17L22D6RA61 530 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 USP17L17D6RBQ6 530 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 USP17L19D6RCP7 530 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 USP17L20D6RJB6 530 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 ADCY3O60266 1144 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 ZFYP08048 801 aaPredicted RBP13.77□□□□□ -0.21
GPM6B-208ENST00000475307 MX1P20591 662 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 GUCY1A2P33402 732 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 USP17L24Q0WX57 530 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 MTFR1Q15390 333 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 DDX60LQ5H9U9 1706 aaKnown RBP13.77□□□□□ -0.21
GPM6B-208ENST00000475307 PI4K2BQ8TCG2 481 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 GCC1Q96CN9 775 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 STRBPQ96SI9 672 aaKnown RBP13.77□□□□□ -0.21
GPM6B-208ENST00000475307 MORF4L1Q9UBU8 362 aa13.77□□□□□ -0.21
GPM6B-208ENST00000475307 CDK8P49336 464 aa13.76□□□□□ -0.21
GPM6B-208ENST00000475307 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
GPM6B-208ENST00000475307 CTR9Q6PD62 1173 aa13.76□□□□□ -0.21
GPM6B-208ENST00000475307 TMEM179Q6ZVK1 233 aa13.76□□□□□ -0.21
GPM6B-208ENST00000475307 CCAR1Q8IX12 1150 aaKnown RBP13.76□□□□□ -0.21
GPM6B-208ENST00000475307 GPRC5AQ8NFJ5 357 aa13.76□□□□□ -0.21
GPM6B-208ENST00000475307 GTF3C2Q8WUA4 911 aaPredicted RBP13.76□□□□□ -0.21
GPM6B-208ENST00000475307 OSBP2Q969R2 916 aa13.76□□□□□ -0.21
GPM6B-208ENST00000475307 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
GPM6B-208ENST00000475307 FSD1Q9BTV5 496 aa13.76□□□□□ -0.21
GPM6B-208ENST00000475307 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
GPM6B-208ENST00000475307 SMIM22K7EJ46 135 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 GPAA1O43292 621 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 PEX10O60683 326 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 CCL5P13501 91 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 AKR1B1P15121 316 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 ELNP15502 786 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 VCAM1P19320 739 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 IRF5Q13568 498 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 AAMPQ13685 434 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 C16orf86Q6ZW13 317 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 PXYLP1Q8TE99 480 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 CCDC17Q96LX7 622 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 RNF208Q9H0X6 261 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 TXNRD2Q9NNW7 524 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
GPM6B-208ENST00000475307 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 M0R2C6 588 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 APPP05067 770 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 GNAT2P19087 354 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 ERVK-9P63128 1117 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 ERVK-24P63145 666 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 ICA1Q05084 483 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
GPM6B-208ENST00000475307 ARHGEF10LQ9HCE6 1279 aa13.74□□□□□ -0.21
GPM6B-208ENST00000475307 INHAP05111 366 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 MAPK4P31152 587 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 TDO2P48775 406 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 ATP2B2Q01814 1243 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 Q3C1V9 767 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 SBK1Q52WX2 424 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 GIMAP6Q6P9H5 292 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 CLEC10AQ8IUN9 316 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 STK11IPQ8N1F8 1099 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 RWDD1Q9H446 243 aaPredicted RBP13.73□□□□□ -0.21
GPM6B-208ENST00000475307 SH2D4AQ9H788 454 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
GPM6B-208ENST00000475307 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
GPM6B-208ENST00000475307 SALL3Q9BXA9 1300 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 GJB1P08034 283 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 CYP2B6P20813 491 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 CCNA1P78396 465 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
GPM6B-208ENST00000475307 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 TANGO6Q9C0B7 1094 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 UNC93B1Q9H1C4 597 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 GJD2Q9UKL4 321 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 MGAMO43451 1857 aa13.72□□□□□ -0.21
GPM6B-208ENST00000475307 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.21
GPM6B-208ENST00000475307 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
GPM6B-208ENST00000475307 GJA8P48165 433 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 PDE1AP54750 535 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 COG2Q14746 738 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 ZMYM1Q5SVZ6 1142 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 WDR78Q5VTH9 848 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 PRPF38BQ5VTL8 546 aaKnown RBP13.71□□□□□ -0.21
GPM6B-208ENST00000475307 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 POTEEQ6S8J3 1075 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 SOCS4Q8WXH5 440 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 LPAR1Q92633 364 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 NACAP1Q9BZK3 213 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 PORCNQ9H237 461 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 STAP2Q9UGK3 403 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 TMX2Q9Y320 296 aa13.71□□□□□ -0.21
GPM6B-208ENST00000475307 MYH7P12883 1935 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms