RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 DEKP35659 375 aaKnown RBP23.68■■□□□ 1.38
EDEM3-206ENST00000474725 TROAPQ12815 778 aa23.68■■□□□ 1.38
EDEM3-206ENST00000474725 RASA3Q14644 834 aa23.68■■□□□ 1.38
EDEM3-206ENST00000474725 RTN1Q16799 776 aa23.68■■□□□ 1.38
EDEM3-206ENST00000474725 CERKLQ49MI3 558 aaPredicted RBP23.68■■□□□ 1.38
EDEM3-206ENST00000474725 CCDC17Q96LX7 622 aa23.68■■□□□ 1.38
EDEM3-206ENST00000474725 IGKV6D-41A0A0C4DH26 115 aa23.67■■□□□ 1.38
EDEM3-206ENST00000474725 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 HMGN5P82970 282 aaKnown RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 TMEM47Q9BQJ4 181 aa23.67■■□□□ 1.38
EDEM3-206ENST00000474725 DDAH1O94760 285 aa23.67■■□□□ 1.38
EDEM3-206ENST00000474725 HIRAP54198 1017 aaPredicted RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 TNFAIP1Q13829 316 aa23.67■■□□□ 1.38
EDEM3-206ENST00000474725 NTRK3Q16288 839 aa23.67■■□□□ 1.38
EDEM3-206ENST00000474725 FOXD4L5Q5VV16 416 aaPredicted RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 LARP1BQ659C4 914 aaKnown RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 FOXD4L4Q8WXT5 416 aaPredicted RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 TNPO1Q92973 898 aaKnown RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 HERC5Q9UII4 1024 aaKnown RBP23.67■■□□□ 1.38
EDEM3-206ENST00000474725 BRD1O95696 1058 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 CALM1P0DP23 149 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 CALM2P0DP24 149 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 CALM3P0DP25 149 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 FDPSP14324 419 aaKnown RBP23.66■■□□□ 1.38
EDEM3-206ENST00000474725 NOVP48745 357 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 FAM184AQ8NB25 1140 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 PNMA1Q8ND90 353 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 MTMR4Q9NYA4 1195 aa23.66■■□□□ 1.38
EDEM3-206ENST00000474725 STX6O43752 255 aa23.65■■□□□ 1.38
EDEM3-206ENST00000474725 LMOD1P29536 600 aaPredicted RBP23.65■■□□□ 1.38
EDEM3-206ENST00000474725 SHROOM1Q2M3G4 852 aaPredicted RBP23.65■■□□□ 1.38
EDEM3-206ENST00000474725 DPY19L2Q6NUT2 758 aa23.65■■□□□ 1.38
EDEM3-206ENST00000474725 CPLX2Q6PUV4 134 aaKnown RBP23.65■■□□□ 1.38
EDEM3-206ENST00000474725 ANGEL2Q5VTE6 544 aaKnown RBP23.65■■□□□ 1.38
EDEM3-206ENST00000474725 CCDC196A0A1B0GTZ2 297 aa23.64■■□□□ 1.37
EDEM3-206ENST00000474725 RRP1BQ14684 758 aaKnown RBP23.64■■□□□ 1.37
EDEM3-206ENST00000474725 CLEC10AQ8IUN9 316 aa23.64■■□□□ 1.37
EDEM3-206ENST00000474725 TEPSINQ96N21 525 aa23.64■■□□□ 1.37
EDEM3-206ENST00000474725 CDKL5O76039 1030 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 GDF11O95390 407 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 PDCP20941 246 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 PPP2R5BQ15173 497 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 MIGA2Q7L4E1 593 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 PHKBQ93100 1093 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 ORC3Q9UBD5 711 aaPredicted RBP23.63■■□□□ 1.37
EDEM3-206ENST00000474725 WDR33Q9C0J8 1336 aaKnown RBP23.63■■□□□ 1.37
EDEM3-206ENST00000474725 TBC1D12O60347 775 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 TOP1P11387 765 aaKnown RBP23.63■■□□□ 1.37
EDEM3-206ENST00000474725 CMTR1Q8N1G2 835 aaKnown RBP23.63■■□□□ 1.37
EDEM3-206ENST00000474725 DEFB129Q9H1M3 183 aa23.63■■□□□ 1.37
EDEM3-206ENST00000474725 ADARB2Q9NS39 739 aaKnown RBP23.63■■□□□ 1.37
EDEM3-206ENST00000474725 GREB1LQ9C091 1923 aaPredicted RBP23.62■■□□□ 1.37
EDEM3-206ENST00000474725 IFNAR1P17181 557 aa23.62■■□□□ 1.37
EDEM3-206ENST00000474725 ABCB5Q2M3G0 1257 aa23.62■■□□□ 1.37
EDEM3-206ENST00000474725 RBM28Q9NW13 759 aaKnown RBP23.62■■□□□ 1.37
EDEM3-206ENST00000474725 CLIP2Q9UDT6 1046 aa23.62■■□□□ 1.37
EDEM3-206ENST00000474725 MTMR6Q9Y217 621 aa23.62■■□□□ 1.37
EDEM3-206ENST00000474725 JAG1P78504 1218 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 APOBEC3FQ8IUX4 373 aaKnown RBP23.61■■□□□ 1.37
EDEM3-206ENST00000474725 CCDC82Q8N4S0 544 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 CTCFLQ8NI51 663 aaPredicted RBP23.61■■□□□ 1.37
EDEM3-206ENST00000474725 GGA3Q9NZ52 723 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 MTMR7Q9Y216 660 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 KIF3AQ9Y496 699 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 VPS37CA5D8V6 355 aaPredicted RBP23.61■■□□□ 1.37
EDEM3-206ENST00000474725 TTLL1O95922 423 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 ZSCAN22P10073 491 aaPredicted RBP23.61■■□□□ 1.37
EDEM3-206ENST00000474725 FOSBP53539 338 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 MAP3K10Q02779 954 aa23.61■■□□□ 1.37
EDEM3-206ENST00000474725 ZC3H4Q9UPT8 1303 aaKnown RBP23.6■■□□□ 1.37
EDEM3-206ENST00000474725 PLEKHA8P1O95397 391 aa23.6■■□□□ 1.37
EDEM3-206ENST00000474725 GUCY1A2P33402 732 aa23.6■■□□□ 1.37
EDEM3-206ENST00000474725 SSRP1Q08945 709 aaKnown RBP23.6■■□□□ 1.37
EDEM3-206ENST00000474725 SEPT2Q15019 361 aa23.6■■□□□ 1.37
EDEM3-206ENST00000474725 TMEM179Q6ZVK1 233 aa23.6■■□□□ 1.37
EDEM3-206ENST00000474725 NBPF11Q86T75 865 aa23.6■■□□□ 1.37
EDEM3-206ENST00000474725 L3MBTL3Q96JM7 780 aaPredicted RBP23.6■■□□□ 1.37
EDEM3-206ENST00000474725 MAP3K14Q99558 947 aa23.6■■□□□ 1.37
EDEM3-206ENST00000474725 SLC26A6Q9BXS9 759 aa23.6■■□□□ 1.37
EDEM3-206ENST00000474725 FMNL1O95466 1100 aaPredicted RBP23.59■■□□□ 1.37
EDEM3-206ENST00000474725 GRM4Q14833 912 aa23.59■■□□□ 1.37
EDEM3-206ENST00000474725 LRRC47Q8N1G4 583 aaKnown RBP23.59■■□□□ 1.37
EDEM3-206ENST00000474725 GLTPD2A6NH11 291 aa23.59■■□□□ 1.37
EDEM3-206ENST00000474725 GH2P01242 217 aa23.59■■□□□ 1.37
EDEM3-206ENST00000474725 PDIA4P13667 645 aaKnown RBP23.59■■□□□ 1.37
EDEM3-206ENST00000474725 ATP2B2Q01814 1243 aa23.59■■□□□ 1.37
EDEM3-206ENST00000474725 TMTC3Q6ZXV5 915 aa23.59■■□□□ 1.37
EDEM3-206ENST00000474725 KANSL2Q9H9L4 492 aa23.59■■□□□ 1.37
EDEM3-206ENST00000474725 CABP5Q9NP86 173 aa23.59■■□□□ 1.37
EDEM3-206ENST00000474725 KIF5BP33176 963 aa23.58■■□□□ 1.37
EDEM3-206ENST00000474725 FUT2Q10981 343 aa23.58■■□□□ 1.37
EDEM3-206ENST00000474725 NBPF12Q5TAG4 269 aaPredicted RBP23.58■■□□□ 1.37
EDEM3-206ENST00000474725 CDC37L1Q7L3B6 337 aa23.58■■□□□ 1.37
EDEM3-206ENST00000474725 STK36Q9NRP7 1315 aa23.58■■□□□ 1.36
EDEM3-206ENST00000474725 UBE2Q2LH0YL09 131 aa23.57■■□□□ 1.36
EDEM3-206ENST00000474725 PPP4R3BQ5MIZ7 849 aa23.57■■□□□ 1.36
EDEM3-206ENST00000474725 RASGRP2Q7LDG7 609 aa23.57■■□□□ 1.36
EDEM3-206ENST00000474725 STAG2Q8N3U4 1231 aa23.57■■□□□ 1.36
EDEM3-206ENST00000474725 SRBD1Q8N5C6 995 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms