RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 FARP2O94887 1054 aaPredicted RBP18.2■□□□□ 0.5
VARS-223ENST00000474643 MBD4O95243 580 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 HMGCRP04035 888 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 MAPK4P31152 587 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 PLCD1P51178 756 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 ANKRD45Q5TZF3 282 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 LCORLQ8N3X6 602 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 SOCS4Q8WXH5 440 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 SHISA4Q96DD7 197 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 DEFB118Q96PH6 123 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 MORF4L1Q9UBU8 362 aa18.2■□□□□ 0.5
VARS-223ENST00000474643 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
VARS-223ENST00000474643 ERVK-24P63145 666 aa18.19■□□□□ 0.5
VARS-223ENST00000474643 CCNA1P78396 465 aa18.19■□□□□ 0.5
VARS-223ENST00000474643 HAUS7Q99871 368 aa18.19■□□□□ 0.5
VARS-223ENST00000474643 NUDT12Q9BQG2 462 aa18.19■□□□□ 0.5
VARS-223ENST00000474643 EMILIN3Q9NT22 766 aa18.19■□□□□ 0.5
VARS-223ENST00000474643 SWAP70Q9UH65 585 aa18.19■□□□□ 0.5
VARS-223ENST00000474643 GLRX3O76003 335 aaKnown RBP18.18■□□□□ 0.5
VARS-223ENST00000474643 SGPL1O95470 568 aa18.18■□□□□ 0.5
VARS-223ENST00000474643 CYP2B6P20813 491 aa18.18■□□□□ 0.5
VARS-223ENST00000474643 SHMT1P34896 483 aa18.18■□□□□ 0.5
VARS-223ENST00000474643 ADD2P35612 726 aa18.18■□□□□ 0.5
VARS-223ENST00000474643 KIAA1683Q9H0B3 1180 aa18.18■□□□□ 0.5
VARS-223ENST00000474643 HMX1Q9NP08 348 aaPredicted RBP18.18■□□□□ 0.5
VARS-223ENST00000474643 DCP1AQ9NPI6 582 aaPredicted RBP18.18■□□□□ 0.5
VARS-223ENST00000474643 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
VARS-223ENST00000474643 ECHDC1Q9NTX5 307 aa18.18■□□□□ 0.5
VARS-223ENST00000474643 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
VARS-223ENST00000474643 CAPN2P17655 700 aa18.17■□□□□ 0.5
VARS-223ENST00000474643 SEPT2Q15019 361 aa18.17■□□□□ 0.5
VARS-223ENST00000474643 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
VARS-223ENST00000474643 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.17■□□□□ 0.53e-6■■■■■ 35.6
VARS-223ENST00000474643 NR2E3Q9Y5X4 410 aa18.17■□□□□ 0.5
VARS-223ENST00000474643 TCRBV5S4A2TA0A5A2 114 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 VCAM1P19320 739 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 ERICH6BQ5W0A0 696 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 TRMT44Q8IYL2 757 aaKnown RBP18.16■□□□□ 0.5
VARS-223ENST00000474643 ACER1Q8TDN7 264 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 C12orf42Q96LP6 360 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 RPAP3Q9H6T3 665 aaPredicted RBP18.16■□□□□ 0.5
VARS-223ENST00000474643 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 ARHGEF10LQ9HCE6 1279 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 TXNRD2Q9NNW7 524 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 SLC4A4Q9Y6R1 1079 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 IVNS1ABPQ9Y6Y0 642 aa18.16■□□□□ 0.5
VARS-223ENST00000474643 H0YGN5 161 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 PEX10O60683 326 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 CYP2D6P10635 497 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 RGS2P41220 211 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 ATP2B2Q01814 1243 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 HABP4Q5JVS0 413 aaKnown RBP18.15■□□□□ 0.5
VARS-223ENST00000474643 B4GALNT3Q6L9W6 998 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 TMEM179Q6ZVK1 233 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 PLEKHH3Q7Z736 793 aa18.15■□□□□ 0.5
VARS-223ENST00000474643 ERC2O15083 957 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 PRKAB2O43741 272 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 UBE3CQ15386 1083 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 LRRFIP1Q32MZ4 808 aaKnown RBP18.14■□□□□ 0.49
VARS-223ENST00000474643 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 SAMD1Q6SPF0 538 aaPredicted RBP18.14■□□□□ 0.49
VARS-223ENST00000474643 GPR142Q7Z601 462 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 PAK6Q9NQU5 681 aaPredicted RBP18.14■□□□□ 0.49
VARS-223ENST00000474643 RBPJLQ9UBG7 517 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 RPTORQ8N122 1335 aa18.14■□□□□ 0.49
VARS-223ENST00000474643 MYH7P12883 1935 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 DDX60LQ5H9U9 1706 aaKnown RBP18.13■□□□□ 0.49
VARS-223ENST00000474643 RAD21O60216 631 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 EVI5O60447 810 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 ICA1Q05084 483 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 GABPAQ06546 454 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 SLC44A5Q8NCS7 719 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 DYNLL2Q96FJ2 89 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 PORCNQ9H237 461 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 GJD2Q9UKL4 321 aa18.13■□□□□ 0.49
VARS-223ENST00000474643 IGHDP01880 384 aa18.12■□□□□ 0.49
VARS-223ENST00000474643 NEFLP07196 543 aa18.12■□□□□ 0.49
VARS-223ENST00000474643 PRKAR2AP13861 404 aaKnown RBP18.12■□□□□ 0.49
VARS-223ENST00000474643 SLFNL1Q499Z3 407 aa18.12■□□□□ 0.49
VARS-223ENST00000474643 NECAB2Q7Z6G3 386 aa18.12■□□□□ 0.49
VARS-223ENST00000474643 APBA2Q99767 749 aa18.12■□□□□ 0.49
VARS-223ENST00000474643 LNPKQ9C0E8 428 aa18.12■□□□□ 0.49
VARS-223ENST00000474643 USP17L12C9JPN9 530 aa18.11■□□□□ 0.49
VARS-223ENST00000474643 USP17L21D6R901 530 aa18.11■□□□□ 0.49
VARS-223ENST00000474643 XRCC5P13010 732 aaKnown RBP18.11■□□□□ 0.49
VARS-223ENST00000474643 MX1P20591 662 aa18.11■□□□□ 0.49
VARS-223ENST00000474643 EVX2Q03828 476 aa18.11■□□□□ 0.49
VARS-223ENST00000474643 TRIB2Q92519 343 aa18.11■□□□□ 0.49
VARS-223ENST00000474643 CCDC17Q96LX7 622 aa18.11■□□□□ 0.49
VARS-223ENST00000474643 ARPP21Q9UBL0 812 aaPredicted RBP18.11■□□□□ 0.49
VARS-223ENST00000474643 TTC41PQ6P2S7 1318 aa18.11■□□□□ 0.49
VARS-223ENST00000474643 CYP2D7A0A087X1C5 515 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms