RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 BIN1O00499 593 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MCF2LO15068 1137 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 XPOTO43592 962 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 ADAMTS4O75173 837 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 ERLIN1O75477 346 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 ENDOUP21128 410 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 HSD17B2P37059 387 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 ZBTB17Q13105 803 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 VPS53Q5VIR6 699 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 NUGGCQ68CJ6 796 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 RAPH1Q70E73 1250 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 ARMC2Q8NEN0 867 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CLMNQ96JQ2 1002 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 SLC13A1Q9BZW2 595 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 ALG13Q9NP73 1137 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 P4HA2O15460 535 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 B4GALT4O60513 344 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 RTN2O75298 545 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CCT8P50990 548 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TGFB2P61812 414 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 LRP8Q14114 963 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 WSCD2Q2TBF2 565 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TKFCQ3LXA3 575 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 RILPL1Q5EBL4 403 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 DACT2Q5SW24 774 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 ERC1Q8IUD2 1116 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 SPATA2LQ8IUW3 424 aaPredicted RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 GRAMD2AQ8IUY3 354 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TEX11Q8IYF3 940 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TMCO5AQ8N6Q1 288 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 ZNF606Q8WXB4 792 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CEP295NLQ96MC4 621 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 NIFKQ9BYG3 293 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 TRIM8Q9BZR9 551 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 SYNCQ9H7C4 482 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 VCPKMTQ9H867 229 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 NDFIP2Q9NV92 336 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 POLR3EQ9NVU0 708 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 FANCLQ9NW38 375 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MRFAP1Q9Y605 127 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 DHX29Q7Z478 1369 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 GOLGA6L10A0A0M3HER8 536 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 KDM1AO60341 852 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CAPN3P20807 821 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MCM2P49736 904 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 RENBPP51606 427 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 LIMK1P53667 647 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MOGSQ13724 837 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 NEDD9Q14511 834 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TUBB8Q3ZCM7 444 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TBC1D9Q6ZT07 1266 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 DGLUCYQ7Z3D6 616 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 PPFIBP1Q86W92 1011 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 RTKN2Q8IZC4 609 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 PARD3BQ8TEW8 1205 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CNDP1Q96KN2 507 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CRISPLD2Q9H0B8 497 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CCSER2Q9H7U1 834 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TTLL3Q9Y4R7 772 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MINK1Q8N4C8 1332 aaPredicted RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 TMEM221A6NGB7 291 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 PLSCR1O15162 318 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 GPR37L1O60883 481 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 RTN3O95197 1032 aaPredicted RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 TMOD1P28289 359 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 HSPA1LP34931 641 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 RDXP35241 583 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 NR2C2P49116 596 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 KRT83P78385 493 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MRPS35P82673 323 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 CD83Q01151 205 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 GBE1Q04446 702 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 PABPC4Q13310 644 aaKnown RBP eCLIP3.95□□□□□ -1.78
UBR3-208ENST00000474426 SMAD4Q13485 552 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 SSPNQ14714 243 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CAVIN4Q5BKX8 364 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 FAM180BQ6P0A1 224 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MZT2AQ6P582 158 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 POMZP3Q6PJE2 187 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 SPOCD1Q6ZMY3 1216 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 SDCCAG8Q86SQ7 713 aaPredicted RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 CEP57L1Q8IYX8 460 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 TRIML2Q8N7C3 387 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 IPMKQ8NFU5 416 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 PIBF1Q8WXW3 757 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 GLT8D2Q9H1C3 349 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 MRPL46Q9H2W6 279 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 VCX3BQ9H321 246 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 BICC1Q9H694 974 aaKnown RBP3.95□□□□□ -1.78
UBR3-208ENST00000474426 TCP11L1Q9NUJ3 509 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 PPP4R2Q9NY27 417 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 CROTQ9UKG9 612 aa3.95□□□□□ -1.78
UBR3-208ENST00000474426 SYNDIG1LA6NDD5 238 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 ATP9BO43861 1147 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 NR1I2O75469 434 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 F2P00734 622 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 ZSCAN22P10073 491 aaPredicted RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 CYP2C19P33261 490 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 RFC5P40937 340 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 MAN2A2P49641 1150 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms