RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.96
ECHDC1-214ENST00000474289 PSMD14O00487 310 aa21.02■□□□□ 0.95
ECHDC1-214ENST00000474289 MAP2K2P36507 400 aa21.02■□□□□ 0.95
ECHDC1-214ENST00000474289 BCAS4Q8TDM0 211 aa21.02■□□□□ 0.95
ECHDC1-214ENST00000474289 RABEP2Q9H5N1 569 aa21.02■□□□□ 0.95
ECHDC1-214ENST00000474289 REXO2Q9Y3B8 237 aaKnown RBP21.02■□□□□ 0.95
ECHDC1-214ENST00000474289 SEMA3EO15041 775 aa21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 SRGAP2O75044 1071 aa21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 TBC1D10CQ8IV04 446 aa21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 ZNF579Q8NAF0 562 aaKnown RBP21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 NUP88Q99567 741 aaPredicted RBP21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 MYL10Q9BUA6 226 aa21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 FAM217BQ9NTX9 383 aaPredicted RBP21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 GRIN2DO15399 1336 aa21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 ARFGEF2Q9Y6D5 1785 aa21.01■□□□□ 0.95
ECHDC1-214ENST00000474289 GPAA1O43292 621 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 ATP1A1P05023 1023 aaKnown RBP21■□□□□ 0.95
ECHDC1-214ENST00000474289 ZFYP08048 801 aaPredicted RBP21■□□□□ 0.95
ECHDC1-214ENST00000474289 CASP1P29466 404 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 MST1RQ04912 1400 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21■□□□□ 0.95
ECHDC1-214ENST00000474289 APPBP2Q92624 585 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 ZNF594Q96JF6 807 aaPredicted RBP21■□□□□ 0.95
ECHDC1-214ENST00000474289 ORAI2Q96SN7 254 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 SLC26A6Q9BXS9 759 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 PCDHB6Q9Y5E3 794 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 ZBTB43O43298 467 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 PPFIA1Q13136 1202 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 NBPF14Q5TI25 921 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 DIS3L2Q8IYB7 885 aaKnown RBP21■□□□□ 0.95
ECHDC1-214ENST00000474289 CAPZA3Q96KX2 299 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 CAPS2Q9BXY5 557 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 SAR1BQ9Y6B6 198 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 WDR17Q8IZU2 1322 aa21■□□□□ 0.95
ECHDC1-214ENST00000474289 GOLGA6BA6NDN3 693 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 EIF3HO15372 352 aaKnown RBP eCLIP20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 AFMP43652 599 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 CHP1Q99653 195 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 CSRNP2Q9H175 543 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 SRPRBQ9Y5M8 271 aaKnown RBP20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 GOLGA8AA7E2F4 631 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 EYA2O00167 538 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 MMP1P03956 469 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 CCDC172P0C7W6 258 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 INPP5BP32019 993 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 KRT31Q15323 416 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
ECHDC1-214ENST00000474289 PPP1R3GB7ZBB8 358 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 NDUFA10O95299 355 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 KRT9P35527 623 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 USP8P40818 1118 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 RILPL1Q5EBL4 403 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 CCNI2Q6ZMN8 369 aaPredicted RBP20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 KCNJ14Q9UNX9 436 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 EPN1Q9Y6I3 576 aaPredicted RBP20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 A0A087X0B3 334 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 SHTN1A0MZ66 631 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 N4BP3O15049 544 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 COBLO75128 1261 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 GUCY1A2P33402 732 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 CNPY4Q8N129 248 aa20.98■□□□□ 0.95
ECHDC1-214ENST00000474289 SCARF1Q14162 830 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 PAPD7Q5XG87 772 aaKnown RBP20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 RGPD5Q99666 1765 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 CAMTA1Q9Y6Y1 1673 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 SLIT3O75094 1523 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 B4E1Z4 1266 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 SNRPA1P09661 255 aaKnown RBP20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 GNGT1P63211 74 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 SSRP1Q08945 709 aaKnown RBP20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 DPYDQ12882 1025 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 SAFBQ15424 915 aaKnown RBP eCLIP20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 NFXL1Q6ZNB6 911 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 RPGRIP1Q96KN7 1286 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 VPS16Q9H269 839 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 TFR2Q9UP52 801 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 STK36Q9NRP7 1315 aa20.97■□□□□ 0.95
ECHDC1-214ENST00000474289 PHKG2P15735 406 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 PRPF38AQ8NAV1 312 aaKnown RBP20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 PUS3Q9BZE2 481 aaKnown RBP20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 HAUS4Q9H6D7 363 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 CEP83Q9Y592 693 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 ADORA1P30542 326 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 NR5A1Q13285 461 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 IGDCC4Q8TDY8 1250 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 RAPGEF4Q8WZA2 1011 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 LY9Q9HBG7 655 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 STRN4Q9NRL3 753 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 LIMA1Q9UHB6 759 aaKnown RBP20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 CTNND2Q9UQB3 1225 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 SAMM50Q9Y512 469 aa20.96■□□□□ 0.95
ECHDC1-214ENST00000474289 TMEM94Q12767 1356 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 SCN11AQ9UI33 1791 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 H7C1W4 665 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 FMNL1O95466 1100 aaPredicted RBP20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 ZC3H6P61129 1189 aaKnown RBP20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 CKAP4Q07065 602 aaKnown RBP20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 TRIM14Q14142 442 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 TTC19Q6DKK2 380 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms