RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 USP17L13C9JLJ4 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L11C9JVI0 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L18D6R9N7 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L22D6RA61 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L17D6RBQ6 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L19D6RCP7 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L20D6RJB6 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 APPP05067 770 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 CTGFP29279 349 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 USP17L24Q0WX57 530 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 SHROOM1Q2M3G4 852 aaPredicted RBP22.3■■□□□ 1.16
CCDC171-206ENST00000474193 GIMAP6Q6P9H5 292 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 SH3TC2Q8TF17 1288 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 STRBPQ96SI9 672 aaKnown RBP22.3■■□□□ 1.16
CCDC171-206ENST00000474193 P2RX7Q99572 595 aaKnown RBP22.3■■□□□ 1.16
CCDC171-206ENST00000474193 KIAA1683Q9H0B3 1180 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 EMILIN3Q9NT22 766 aa22.3■■□□□ 1.16
CCDC171-206ENST00000474193 ARPP21Q9UBL0 812 aaPredicted RBP22.3■■□□□ 1.16
CCDC171-206ENST00000474193 CYP2D6P10635 497 aa22.29■■□□□ 1.16
CCDC171-206ENST00000474193 PRKCZQ05513 592 aa22.29■■□□□ 1.16
CCDC171-206ENST00000474193 SEPT2Q15019 361 aa22.29■■□□□ 1.16
CCDC171-206ENST00000474193 SLAIN1Q8ND83 568 aa22.29■■□□□ 1.16
CCDC171-206ENST00000474193 C12orf42Q96LP6 360 aa22.29■■□□□ 1.16
CCDC171-206ENST00000474193 SH2D4AQ9H788 454 aa22.29■■□□□ 1.16
CCDC171-206ENST00000474193 LOC285556D6RIA3 1793 aa22.29■■□□□ 1.16
CCDC171-206ENST00000474193 MYCP01106 439 aaPredicted RBP22.28■■□□□ 1.16
CCDC171-206ENST00000474193 CDK8P49336 464 aa22.28■■□□□ 1.16
CCDC171-206ENST00000474193 HERVK_113P62684 666 aa22.28■■□□□ 1.16
CCDC171-206ENST00000474193 GPRC5AQ8NFJ5 357 aa22.28■■□□□ 1.16
CCDC171-206ENST00000474193 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
CCDC171-206ENST00000474193 NACAP1Q9BZK3 213 aa22.28■■□□□ 1.16
CCDC171-206ENST00000474193 ZNF287Q9HBT7 754 aa22.28■■□□□ 1.16
CCDC171-206ENST00000474193 ARHGEF10LQ9HCE6 1279 aa22.28■■□□□ 1.16
CCDC171-206ENST00000474193 CWC22Q9HCG8 908 aaKnown RBP22.28■■□□□ 1.16
CCDC171-206ENST00000474193 ADCY3O60266 1144 aa22.27■■□□□ 1.16
CCDC171-206ENST00000474193 CHGBP05060 677 aa22.27■■□□□ 1.16
CCDC171-206ENST00000474193 FLT3LGP49771 235 aa22.27■■□□□ 1.16
CCDC171-206ENST00000474193 CTR9Q6PD62 1173 aa22.27■■□□□ 1.16
CCDC171-206ENST00000474193 PI4K2BQ8TCG2 481 aa22.27■■□□□ 1.16
CCDC171-206ENST00000474193 OSBP2Q969R2 916 aa22.27■■□□□ 1.16
CCDC171-206ENST00000474193 MORF4L1Q9UBU8 362 aa22.27■■□□□ 1.16
CCDC171-206ENST00000474193 MGAMO43451 1857 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 POTEFA5A3E0 1075 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 GPAA1O43292 621 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 TDO2P48775 406 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 SBK1Q52WX2 424 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 C16orf86Q6ZW13 317 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 ACER1Q8TDN7 264 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 MKNK2Q9HBH9 465 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 GABRQQ9UN88 632 aa22.26■■□□□ 1.15
CCDC171-206ENST00000474193 ZSWIM8A7E2V4 1837 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 MINDY4BA8MYZ0 360 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 CCNA1P78396 465 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 IRF5Q13568 498 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 SLC44A5Q8NCS7 719 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 NKX2-3Q8TAU0 364 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 OTUD7AQ8TE49 926 aaPredicted RBP22.25■■□□□ 1.15
CCDC171-206ENST00000474193 PXYLP1Q8TE99 480 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 EVI5LQ96CN4 794 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 PAGR1Q9BTK6 254 aa22.25■■□□□ 1.15
CCDC171-206ENST00000474193 BAZ2AQ9UIF9 1905 aaKnown RBP22.24■■□□□ 1.15
CCDC171-206ENST00000474193 CYP2D7A0A087X1C5 515 aa22.24■■□□□ 1.15
CCDC171-206ENST00000474193 GSG1L2A8MUP6 293 aa22.24■■□□□ 1.15
CCDC171-206ENST00000474193 PATL2C9JE40 543 aaKnown RBP22.24■■□□□ 1.15
CCDC171-206ENST00000474193 MAPK4P31152 587 aa22.24■■□□□ 1.15
CCDC171-206ENST00000474193 CATSPERGQ6ZRH7 1159 aa22.24■■□□□ 1.15
CCDC171-206ENST00000474193 KIAA0100Q14667 2235 aaKnown RBP22.24■■□□□ 1.15
CCDC171-206ENST00000474193 DDX60LQ5H9U9 1706 aaKnown RBP22.23■■□□□ 1.15
CCDC171-206ENST00000474193 SLC3A2P08195 630 aaKnown RBP22.23■■□□□ 1.15
CCDC171-206ENST00000474193 AKR1B1P15121 316 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 VCAM1P19320 739 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 EN2P19622 333 aaPredicted RBP22.23■■□□□ 1.15
CCDC171-206ENST00000474193 GUCY1A2P33402 732 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 PDE1AP54750 535 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 ICA1Q05084 483 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 RPAP3Q9H6T3 665 aaPredicted RBP22.23■■□□□ 1.15
CCDC171-206ENST00000474193 KANSL2Q9H9L4 492 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 HOXC10Q9NYD6 342 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 STAP2Q9UGK3 403 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 RABGAP1Q9Y3P9 1069 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 MYH8P13535 1937 aa22.23■■□□□ 1.15
CCDC171-206ENST00000474193 ERVK-9P63128 1117 aa22.22■■□□□ 1.15
CCDC171-206ENST00000474193 ERVK-24P63145 666 aa22.22■■□□□ 1.15
CCDC171-206ENST00000474193 ATP2B2Q01814 1243 aa22.22■■□□□ 1.15
CCDC171-206ENST00000474193 EVX2Q03828 476 aa22.22■■□□□ 1.15
CCDC171-206ENST00000474193 ZNF444Q8N0Y2 327 aaPredicted RBP22.22■■□□□ 1.15
CCDC171-206ENST00000474193 LPAR1Q92633 364 aa22.22■■□□□ 1.15
CCDC171-206ENST00000474193 RNF208Q9H0X6 261 aa22.22■■□□□ 1.15
CCDC171-206ENST00000474193 RBPJLQ9UBG7 517 aa22.22■■□□□ 1.15
CCDC171-206ENST00000474193 COG2Q14746 738 aa22.21■■□□□ 1.15
CCDC171-206ENST00000474193 TICAM2Q86XR7 235 aa22.21■■□□□ 1.15
CCDC171-206ENST00000474193 NUDT12Q9BQG2 462 aa22.21■■□□□ 1.15
CCDC171-206ENST00000474193 TANGO6Q9C0B7 1094 aa22.21■■□□□ 1.15
CCDC171-206ENST00000474193 M0R2C6 588 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 CCL5P13501 91 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 CAPN2P17655 700 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 ZMYM1Q5SVZ6 1142 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 PLEKHM2Q8IWE5 1019 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 IFNL3Q8IZI9 196 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 SOCS4Q8WXH5 440 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms