RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 USP17L22D6RA61 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 USP17L17D6RBQ6 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 USP17L19D6RCP7 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 USP17L20D6RJB6 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 HLA-DOAP06340 250 aa24.68■■□□□ 1.54
APP-215ENST00000474136 PTPREP23469 700 aa24.68■■□□□ 1.54
APP-215ENST00000474136 CYP2C19P33261 490 aa24.68■■□□□ 1.54
APP-215ENST00000474136 USP17L24Q0WX57 530 aa24.68■■□□□ 1.54
APP-215ENST00000474136 TTC39AQ5SRH9 613 aa24.68■■□□□ 1.54
APP-215ENST00000474136 TRPV1Q8NER1 839 aa24.68■■□□□ 1.54
APP-215ENST00000474136 NPLOC4Q8TAT6 608 aa24.68■■□□□ 1.54
APP-215ENST00000474136 C12orf42Q96LP6 360 aa24.68■■□□□ 1.54
APP-215ENST00000474136 FEZ1Q99689 392 aa24.68■■□□□ 1.54
APP-215ENST00000474136 DBNDD2Q9BQY9 259 aa24.68■■□□□ 1.54
APP-215ENST00000474136 EYSQ5T1H1 3165 aa24.68■■□□□ 1.54
APP-215ENST00000474136 SLC15A5A6NIM6 579 aa24.67■■□□□ 1.54
APP-215ENST00000474136 GLRX3O76003 335 aaKnown RBP24.67■■□□□ 1.54
APP-215ENST00000474136 RTP1P59025 263 aa24.67■■□□□ 1.54
APP-215ENST00000474136 CCNA1P78396 465 aa24.67■■□□□ 1.54
APP-215ENST00000474136 ZNF697Q5TEC3 545 aa24.67■■□□□ 1.54
APP-215ENST00000474136 LPAR1Q92633 364 aa24.67■■□□□ 1.54
APP-215ENST00000474136 PIH1D3Q9NQM4 214 aaKnown RBP24.67■■□□□ 1.54
APP-215ENST00000474136 BTBD7Q9P203 1132 aa24.67■■□□□ 1.54
APP-215ENST00000474136 TNNQ9UQP3 1299 aa24.67■■□□□ 1.54
APP-215ENST00000474136 ATP2B2Q01814 1243 aa24.66■■□□□ 1.54
APP-215ENST00000474136 CATSPERGQ6ZRH7 1159 aa24.66■■□□□ 1.54
APP-215ENST00000474136 MAST2Q6P0Q8 1798 aa24.66■■□□□ 1.54
APP-215ENST00000474136 DNM1LO00429 736 aa24.65■■□□□ 1.54
APP-215ENST00000474136 IPO8O15397 1037 aaKnown RBP24.65■■□□□ 1.54
APP-215ENST00000474136 GNAI2P04899 355 aa24.65■■□□□ 1.54
APP-215ENST00000474136 ZAP70P43403 619 aa24.65■■□□□ 1.54
APP-215ENST00000474136 GJC2Q5T442 439 aaPredicted RBP24.65■■□□□ 1.54
APP-215ENST00000474136 ACER1Q8TDN7 264 aa24.65■■□□□ 1.54
APP-215ENST00000474136 CDX2Q99626 313 aaPredicted RBP24.65■■□□□ 1.54
APP-215ENST00000474136 PRKAG2Q9UGJ0 569 aa24.65■■□□□ 1.54
APP-215ENST00000474136 ATP11BQ9Y2G3 1177 aa24.65■■□□□ 1.54
APP-215ENST00000474136 FRMPD3Q5JV73 1810 aa24.65■■□□□ 1.54
APP-215ENST00000474136 MSCO60682 206 aa24.64■■□□□ 1.54
APP-215ENST00000474136 HOXC6P09630 235 aa24.64■■□□□ 1.54
APP-215ENST00000474136 VCAM1P19320 739 aa24.64■■□□□ 1.54
APP-215ENST00000474136 GRB14Q14449 540 aa24.64■■□□□ 1.54
APP-215ENST00000474136 RAB3GAP1Q15042 981 aa24.64■■□□□ 1.54
APP-215ENST00000474136 SHHQ15465 462 aa24.64■■□□□ 1.54
APP-215ENST00000474136 TNNI3KQ59H18 835 aa24.64■■□□□ 1.54
APP-215ENST00000474136 C9orf50Q5SZB4 431 aa24.64■■□□□ 1.54
APP-215ENST00000474136 ATF7IPQ6VMQ6 1270 aa24.64■■□□□ 1.54
APP-215ENST00000474136 FPGT-TNNI3KV9GXZ4 949 aa24.64■■□□□ 1.54
APP-215ENST00000474136 CDK5RAP2Q96SN8 1893 aa24.64■■□□□ 1.54
APP-215ENST00000474136 CYP7A1P22680 504 aa24.63■■□□□ 1.53
APP-215ENST00000474136 CCDC158Q5M9N0 1113 aa24.63■■□□□ 1.53
APP-215ENST00000474136 ANO1Q5XXA6 986 aa24.63■■□□□ 1.53
APP-215ENST00000474136 TATDN1Q6P1N9 297 aa24.63■■□□□ 1.53
APP-215ENST00000474136 ARHGAP45Q92619 1136 aa24.63■■□□□ 1.53
APP-215ENST00000474136 IVNS1ABPQ9Y6Y0 642 aa24.63■■□□□ 1.53
APP-215ENST00000474136 BCAR3O75815 825 aa24.62■■□□□ 1.53
APP-215ENST00000474136 MS4A1P11836 297 aa24.62■■□□□ 1.53
APP-215ENST00000474136 CYBAP13498 195 aa24.62■■□□□ 1.53
APP-215ENST00000474136 MIGA1Q8NAN2 632 aa24.62■■□□□ 1.53
APP-215ENST00000474136 KIAA1683Q9H0B3 1180 aa24.62■■□□□ 1.53
APP-215ENST00000474136 SPDYE16A6NNV3 312 aaPredicted RBP24.61■■□□□ 1.53
APP-215ENST00000474136 IGHA2P01877 340 aa24.61■■□□□ 1.53
APP-215ENST00000474136 USP14P54578 494 aa24.61■■□□□ 1.53
APP-215ENST00000474136 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
APP-215ENST00000474136 LBX2Q6XYB7 198 aa24.61■■□□□ 1.53
APP-215ENST00000474136 SEMA6BQ9H3T3 888 aa24.61■■□□□ 1.53
APP-215ENST00000474136 GPR108Q9NPR9 543 aa24.61■■□□□ 1.53
APP-215ENST00000474136 PRUNE2Q8WUY3 3088 aa24.61■■□□□ 1.53
APP-215ENST00000474136 FOCADQ5VW36 1801 aa24.61■■□□□ 1.53
APP-215ENST00000474136 NEFLP07196 543 aa24.61■■□□□ 1.53
APP-215ENST00000474136 SLC39A5Q6ZMH5 540 aa24.61■■□□□ 1.53
APP-215ENST00000474136 MAFAQ8NHW3 353 aaPredicted RBP24.61■■□□□ 1.53
APP-215ENST00000474136 RPAP3Q9H6T3 665 aaPredicted RBP24.61■■□□□ 1.53
APP-215ENST00000474136 PRDM5Q9NQX1 630 aaPredicted RBP24.61■■□□□ 1.53
APP-215ENST00000474136 SERPINB13Q9UIV8 391 aa24.61■■□□□ 1.53
APP-215ENST00000474136 SPTBN5Q9NRC6 3674 aaKnown RBP24.6■■□□□ 1.53
APP-215ENST00000474136 TRIM27P14373 513 aa24.6■■□□□ 1.53
APP-215ENST00000474136 USP5P45974 858 aa24.6■■□□□ 1.53
APP-215ENST00000474136 CERKLQ49MI3 558 aaPredicted RBP24.6■■□□□ 1.53
APP-215ENST00000474136 BADQ92934 168 aa24.6■■□□□ 1.53
APP-215ENST00000474136 MYCNP04198 464 aaPredicted RBP24.59■■□□□ 1.53
APP-215ENST00000474136 ABCB5Q2M3G0 1257 aa24.59■■□□□ 1.53
APP-215ENST00000474136 TRIM60Q495X7 471 aa24.59■■□□□ 1.53
APP-215ENST00000474136 MYLIPQ8WY64 445 aa24.59■■□□□ 1.53
APP-215ENST00000474136 TTYH1Q9H313 450 aaPredicted RBP24.59■■□□□ 1.53
APP-215ENST00000474136 TLR7Q9NYK1 1049 aaKnown RBP24.59■■□□□ 1.53
APP-215ENST00000474136 LTBP2Q14767 1821 aa24.58■■□□□ 1.53
APP-215ENST00000474136 MYO5AQ9Y4I1 1855 aaKnown RBP24.58■■□□□ 1.53
APP-215ENST00000474136 IDH1O75874 414 aaKnown RBP24.58■■□□□ 1.52
APP-215ENST00000474136 ADORA2AP29274 412 aa24.58■■□□□ 1.52
APP-215ENST00000474136 GUCY1A2P33402 732 aa24.58■■□□□ 1.52
APP-215ENST00000474136 OS9Q13438 667 aaPredicted RBP24.58■■□□□ 1.52
APP-215ENST00000474136 ZKSCAN2Q63HK3 967 aa24.58■■□□□ 1.52
APP-215ENST00000474136 DPP9Q86TI2 863 aa24.58■■□□□ 1.52
APP-215ENST00000474136 ARRDC4Q8NCT1 418 aa24.58■■□□□ 1.52
APP-215ENST00000474136 CLUAP1Q96AJ1 413 aa24.58■■□□□ 1.52
APP-215ENST00000474136 ZNF512BQ96KM6 892 aaPredicted RBP24.58■■□□□ 1.52
APP-215ENST00000474136 MOV10L1Q9BXT6 1211 aaKnown RBP24.58■■□□□ 1.52
APP-215ENST00000474136 EHD4Q9H223 541 aa24.58■■□□□ 1.52
APP-215ENST00000474136 SHMT1P34896 483 aa24.57■■□□□ 1.52
APP-215ENST00000474136 POLA2Q14181 598 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms