RNA–Protein interactions for RNA: ENST00000474106.5

SVIL-208, Transcript of supervillin, human

TSL 4

Gene SVIL, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SVIL-208	ENST00000474106	TCP11L1	Q9NUJ3	509 aa		13.99	□□□□□ -0.17
SVIL-208	ENST00000474106	VPS37C	A5D8V6	355 aa	Predicted RBP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	DCAF8L1	A6NGE4	600 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	RAD21	O60216	631 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	RAB3GAP1	Q15042	981 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	EAPP	Q56P03	285 aa	Predicted RBP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	RCSD1	Q6JBY9	416 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	CPLX2	Q6PUV4	134 aa	Known RBP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	LRRC47	Q8N1G4	583 aa	Known RBP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	PNMA1	Q8ND90	353 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	CCDC17	Q96LX7	622 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	TMEM47	Q9BQJ4	181 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	DEFB129	Q9H1M3	183 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	CLIP2	Q9UDT6	1046 aa		13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	GOLGB1	Q14789	3259 aa	Known RBP	13.98	□□□□□ -0.17
SVIL-208	ENST00000474106	DDAH1	O94760	285 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	GH2	P01242	217 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	EPHX2	P34913	555 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	NT5C2	P49902	561 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	NUCB2	P80303	420 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	RRP1B	Q14684	758 aa	Known RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	SEPT2	Q15019	361 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	LARP1B	Q659C4	914 aa	Known RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	DGKH	Q86XP1	1220 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	FANCB	Q8NB91	859 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	CTCFL	Q8NI51	663 aa	Predicted RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	PHKB	Q93100	1093 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	LLPH	Q9BRT6	129 aa	Known RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	SLC26A6	Q9BXS9	759 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	CABP5	Q9NP86	173 aa		13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	ORC3	Q9UBD5	711 aa	Predicted RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	HERC5	Q9UII4	1024 aa	Known RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	ISY1	Q9ULR0	285 aa	Known RBP	13.97	□□□□□ -0.17
SVIL-208	ENST00000474106	GLTPD2	A6NH11	291 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	CDKL5	O76039	1030 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	CALM1	P0DP23	149 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	CALM2	P0DP24	149 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	CALM3	P0DP25	149 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	TOP1	P11387	765 aa	Known RBP	13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	HMGN5	P82970	282 aa	Known RBP	13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	SSRP1	Q08945	709 aa	Known RBP	13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	TATDN1	Q6P1N9	297 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	RASGRP2	Q7LDG7	609 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	SMARCC2	Q8TAQ2	1214 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	PIBF1	Q8WXW3	757 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	DCPS	Q96C86	337 aa	Known RBP	13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	MTMR4	Q9NYA4	1195 aa		13.96	□□□□□ -0.17
SVIL-208	ENST00000474106	IGKV6D-41	A0A0C4DH26	115 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	CCDC196	A0A1B0GTZ2	297 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106		H3BQV1	296 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	PLEKHA8P1	O95397	391 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	TTLL1	O95922	423 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	SYT1	P21579	422 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	JAG1	P78504	1218 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	GUCY1B3	Q02153	619 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	ICA1	Q05084	483 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	PRKG1	Q13976	671 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	IFFO2	Q5TF58	517 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	DLK2	Q6UY11	383 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	METTL16	Q86W50	562 aa	Known RBP	13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	ANKS1A	Q92625	1134 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	TEPSIN	Q96N21	525 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	RBM28	Q9NW13	759 aa	Known RBP	13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	PGAP2	Q9UHJ9	254 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	FZD1	Q9UP38	647 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	MYH4	Q9Y623	1939 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	PLIN4	Q96Q06	1357 aa		13.95	□□□□□ -0.18
SVIL-208	ENST00000474106	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	ADM5	C9JUS6	153 aa		13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	STX6	O43752	255 aa		13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	GOLGA8H	P0CJ92	632 aa		13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	EEF2	P13639	858 aa	Known RBP	13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	TROAP	Q12815	778 aa		13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	TMEM179	Q6ZVK1	233 aa		13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	TNPO1	Q92973	898 aa	Known RBP	13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	CLEC11A	Q9Y240	323 aa		13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	KIF3A	Q9Y496	699 aa		13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	POLR2A	P24928	1970 aa	Known RBP	13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	GREB1L	Q9C091	1923 aa	Predicted RBP	13.94	□□□□□ -0.18
SVIL-208	ENST00000474106	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	ATAD5	Q96QE3	1844 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	hCG_1642624	A0A1W2PR95	340 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	USP17L5	A8MUK1	530 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	TBC1D12	O60347	775 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	FDPS	P14324	419 aa	Known RBP	13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	KIF5B	P33176	963 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	AKAP17A	Q02040	695 aa	Known RBP	13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	GRM4	Q14833	912 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	NTRK3	Q16288	839 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	CCDC96	Q2M329	555 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	USP17L2	Q6R6M4	530 aa		13.93	□□□□□ -0.18
SVIL-208	ENST00000474106	USP50	Q70EL3	339 aa	Predicted RBP	13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms