RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PLEKHG4Q58EX7 1191 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 TMEM201Q5SNT2 666 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 ZNF648Q5T619 568 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-212ENST00000473961 RNF43Q68DV7 783 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 LRFN4Q6PJG9 635 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 NLRC3Q7RTR2 1065 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 FAM178BQ8IXR5 827 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 SYNPOQ8N3V7 929 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 THAP3Q8WTV1 239 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-212ENST00000473961 DNAJC7Q99615 494 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 CARD10Q9BWT7 1032 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 NRSN2Q9GZP1 204 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 EPN3Q9H201 632 aa6.06□□□□□ -1.44
BRCA1-212ENST00000473961 CWC22Q9HCG8 908 aaKnown RBP6.06□□□□□ -1.44
BRCA1-212ENST00000473961 hCG_2014768A0A024R1R8 64 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 A0A1W2PQH9 124 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 FAM221BA6H8Z2 402 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 IQCA1LA6NCM1 817 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 AGRPO00253 132 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 GJB6O95452 261 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 PGRP06401 933 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 RAG1P15918 1043 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 CCNFP41002 786 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 NLRP12P59046 1061 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 ERVK-24P63145 666 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 IGBP1P78318 339 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 OVOS1Q6IE37 1185 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 ZNF662Q6ZS27 426 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 CYFIP1Q7L576 1253 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 KCT2Q8NC54 265 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 KLHDC7BQ96G42 594 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 DHRS1Q96LJ7 313 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 BRINP2Q9C0B6 783 aa6.05□□□□□ -1.44
BRCA1-212ENST00000473961 LOC100289279A0A1B0GTE1 492 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 TNFRSF10CO14798 259 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 FANCGO15287 622 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 NME1P15531 152 aaKnown RBP6.04□□□□□ -1.44
BRCA1-212ENST00000473961 LIG1P18858 919 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 HOXA10P31260 410 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-212ENST00000473961 ANAPC15P60006 121 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 ID3Q02535 119 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 INPP5AQ14642 412 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 SETDB1Q15047 1291 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 PTPROQ16827 1216 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 C2orf27AQ580R0 203 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 ZC3H12BQ5HYM0 836 aaKnown RBP6.04□□□□□ -1.44
BRCA1-212ENST00000473961 EXOSC6Q5RKV6 272 aaKnown RBP6.04□□□□□ -1.44
BRCA1-212ENST00000473961 CDCP2Q5VXM1 449 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 VHLLQ6RSH7 139 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 MPRIPQ6WCQ1 1025 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 NFXL1Q6ZNB6 911 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.04□□□□□ -1.44
BRCA1-212ENST00000473961 TNKS2Q9H2K2 1166 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 FANCLQ9NW38 375 aa6.04□□□□□ -1.44
BRCA1-212ENST00000473961 HMX2A2RU54 273 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 SLC22A31A6NKX4 558 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 DCDC2CA8MYV0 355 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 ZNF862O60290 1169 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 DNAJC6O75061 913 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 AOC2O75106 756 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 JUNBP17275 347 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-212ENST00000473961 GRK4P32298 578 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 SSRP1Q08945 709 aaKnown RBP6.03□□□□□ -1.44
BRCA1-212ENST00000473961 ZC3H12AQ5D1E8 599 aaKnown RBP6.03□□□□□ -1.44
BRCA1-212ENST00000473961 HGSNATQ68CP4 663 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 C6orf15Q6UXA7 325 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-212ENST00000473961 RUFY4Q6ZNE9 571 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 LRRC47Q8N1G4 583 aaKnown RBP6.03□□□□□ -1.44
BRCA1-212ENST00000473961 SHKBP1Q8TBC3 707 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 ATG4CQ96DT6 458 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 FEZ1Q99689 392 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 WNT10AQ9GZT5 417 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 ATXN3LQ9H3M9 355 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 CNNM2Q9H8M5 875 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 SPC25Q9HBM1 224 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 CYP4F12Q9HCS2 524 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 TMEM260Q9NX78 707 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 KLHL3Q9UH77 587 aa6.03□□□□□ -1.44
BRCA1-212ENST00000473961 ECEL1O95672 775 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 ZNF865P0CJ78 1059 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-212ENST00000473961 ZNF143P52747 638 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-212ENST00000473961 SLC7A5Q01650 507 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 TCEA2Q15560 299 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 LONRF2Q1L5Z9 754 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 UNC5AQ6ZN44 842 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 C16orf86Q6ZW13 317 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 CDC37L1Q7L3B6 337 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 FILIP1Q7Z7B0 1213 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 PHACTR4Q8IZ21 702 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 FAM13CQ8NE31 585 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 ZSWIM2Q8NEG5 633 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 ZNF507Q8TCN5 953 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 WDR18Q9BV38 432 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 CORINQ9Y5Q5 1042 aa6.02□□□□□ -1.45
BRCA1-212ENST00000473961 NCANO14594 1321 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 KDM2BQ8NHM5 1336 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 CCDC163A0A0D9SF12 145 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 CDK8P49336 464 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 DUOXA2Q1HG44 320 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 NUTM2GQ5VZR2 741 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms