RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 MMP1P03956 469 aa20.86■□□□□ 0.93
VARS2-206ENST00000473916 SUPT20HQ8NEM7 779 aa20.86■□□□□ 0.93
VARS2-206ENST00000473916 CTCFLQ8NI51 663 aaPredicted RBP20.86■□□□□ 0.93
VARS2-206ENST00000473916 WASF1Q92558 559 aa20.86■□□□□ 0.93
VARS2-206ENST00000473916 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.86■□□□□ 0.93
VARS2-206ENST00000473916 OSBPL5Q9H0X9 879 aaPredicted RBP20.86■□□□□ 0.93
VARS2-206ENST00000473916 VPS54Q9P1Q0 977 aa20.86■□□□□ 0.93
VARS2-206ENST00000473916 BRCA1P38398 1863 aaKnown RBP20.86■□□□□ 0.93
VARS2-206ENST00000473916 NR1I2O75469 434 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 FKBP1AP62942 108 aaKnown RBP20.85■□□□□ 0.93
VARS2-206ENST00000473916 GABPAQ06546 454 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 PPP2R5BQ15173 497 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 STAG2Q8N3U4 1231 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 ANKS1AQ92625 1134 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 TMEM47Q9BQJ4 181 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 TCP11L1Q9NUJ3 509 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 DACT1Q9NYF0 836 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 VEGFAP15692 232 aaPredicted RBP20.85■□□□□ 0.93
VARS2-206ENST00000473916 U2AF2P26368 475 aaKnown RBP eCLIP20.85■□□□□ 0.93
VARS2-206ENST00000473916 TCP10Q12799 353 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 GNL2Q13823 731 aaKnown RBP20.85■□□□□ 0.93
VARS2-206ENST00000473916 R3HDM1Q15032 1099 aaKnown RBP20.85■□□□□ 0.93
VARS2-206ENST00000473916 ATL3Q6DD88 541 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 LINC00301Q8NCQ3 95 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 OXER1Q8TDS5 423 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 GOLPH3LQ9H4A5 285 aa20.85■□□□□ 0.93
VARS2-206ENST00000473916 PRPF3O43395 683 aaKnown RBP20.84■□□□□ 0.93
VARS2-206ENST00000473916 RAD17O75943 681 aa20.84■□□□□ 0.93
VARS2-206ENST00000473916 NR5A1Q13285 461 aa20.84■□□□□ 0.93
VARS2-206ENST00000473916 CAMK4Q16566 473 aa20.84■□□□□ 0.93
VARS2-206ENST00000473916 CLEC10AQ8IUN9 316 aa20.84■□□□□ 0.93
VARS2-206ENST00000473916 DIS3L2Q8IYB7 885 aaKnown RBP20.84■□□□□ 0.93
VARS2-206ENST00000473916 RTKN2Q8IZC4 609 aa20.84■□□□□ 0.93
VARS2-206ENST00000473916 RGS22Q8NE09 1264 aa20.84■□□□□ 0.93
VARS2-206ENST00000473916 NEDD1Q8NHV4 660 aa20.84■□□□□ 0.93
VARS2-206ENST00000473916 ME1P48163 572 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 SLC35G1Q2M3R5 365 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 CCDC125Q86Z20 511 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 CEP95Q96GE4 821 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 PSMD1Q99460 953 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 ZNF287Q9HBT7 754 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 POLR3EQ9NVU0 708 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 PPP1R1BQ9UD71 204 aaPredicted RBP20.83■□□□□ 0.93
VARS2-206ENST00000473916 PCDHA7Q9UN72 937 aa20.83■□□□□ 0.93
VARS2-206ENST00000473916 AKR1B1P15121 316 aa20.83■□□□□ 0.92
VARS2-206ENST00000473916 AKAP17AQ02040 695 aaKnown RBP20.83■□□□□ 0.92
VARS2-206ENST00000473916 LARGE2Q8N3Y3 721 aa20.83■□□□□ 0.92
VARS2-206ENST00000473916 FAM198AQ9UFP1 575 aa20.83■□□□□ 0.92
VARS2-206ENST00000473916 NASPP49321 788 aaPredicted RBP20.82■□□□□ 0.92
VARS2-206ENST00000473916 STK38Q15208 465 aa20.82■□□□□ 0.92
VARS2-206ENST00000473916 ANO1Q5XXA6 986 aa20.82■□□□□ 0.92
VARS2-206ENST00000473916 MAD2L2Q9UI95 211 aa20.82■□□□□ 0.92
VARS2-206ENST00000473916 SERPINB13Q9UIV8 391 aa20.82■□□□□ 0.92
VARS2-206ENST00000473916 FAM196BA6NMK8 535 aa20.82■□□□□ 0.92
VARS2-206ENST00000473916 NOSTRINQ8IVI9 506 aa20.82■□□□□ 0.92
VARS2-206ENST00000473916 MTFR1LQ9H019 292 aa20.82■□□□□ 0.92
VARS2-206ENST00000473916 PSMD14O00487 310 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 GOLGA8HP0CJ92 632 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 SHMT1P34896 483 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 GRM4Q14833 912 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 SF3A1Q15459 793 aaKnown RBP20.81■□□□□ 0.92
VARS2-206ENST00000473916 SH3BP5LQ7L8J4 393 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 CCAR1Q8IX12 1150 aaKnown RBP20.81■□□□□ 0.92
VARS2-206ENST00000473916 RNF214Q8ND24 703 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 MRIQ9BWK5 157 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 CPVLQ9H3G5 476 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 TSPY26PQ9H489 355 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 TDRD3Q9H7E2 651 aaKnown RBP20.81■□□□□ 0.92
VARS2-206ENST00000473916 DNAJC18Q9H819 358 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 SERPINA10Q9UK55 444 aa20.81■□□□□ 0.92
VARS2-206ENST00000473916 FAM205CA6NFA0 338 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 DDTLA6NHG4 134 aaPredicted RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 NT5C2P49902 561 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 EIF6P56537 245 aaKnown RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 HDLBPQ00341 1268 aaKnown RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 CFAP100Q494V2 611 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 FER1L6Q2WGJ9 1857 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 GREB1LQ9C091 1923 aaPredicted RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 ADAMTS3O15072 1205 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 SPTLC2O15270 562 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 YEATS4O95619 227 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 MARCKSP29966 332 aaPredicted RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 SHROOM1Q2M3G4 852 aaPredicted RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 PRMT6Q96LA8 375 aaPredicted RBP20.8■□□□□ 0.92
VARS2-206ENST00000473916 MAP3K14Q99558 947 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 PHF20Q9BVI0 1012 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 NUP62CLQ9H1M0 184 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 PIM2Q9P1W9 311 aa20.8■□□□□ 0.92
VARS2-206ENST00000473916 POLD1P28340 1107 aa20.79■□□□□ 0.92
VARS2-206ENST00000473916 TOB1P50616 345 aaPredicted RBP20.79■□□□□ 0.92
VARS2-206ENST00000473916 CCDC178Q5BJE1 867 aa20.79■□□□□ 0.92
VARS2-206ENST00000473916 NOM1Q5C9Z4 860 aaKnown RBP20.79■□□□□ 0.92
VARS2-206ENST00000473916 EARS2Q5JPH6 523 aaKnown RBP20.79■□□□□ 0.92
VARS2-206ENST00000473916 MYH4Q9Y623 1939 aa20.79■□□□□ 0.92
VARS2-206ENST00000473916 PLIN4Q96Q06 1357 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 PSDA5PKW4 1024 aaPredicted RBP20.78■□□□□ 0.92
VARS2-206ENST00000473916 KIF5BP33176 963 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 PTPAQ15257 358 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms