RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
TARDBP-206ENST00000473869 ZSCAN16Q9H4T2 348 aaPredicted RBP12.62□□□□□ -0.39
TARDBP-206ENST00000473869 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
TARDBP-206ENST00000473869 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
TARDBP-206ENST00000473869 GJA3Q9Y6H8 435 aa12.62□□□□□ -0.39
TARDBP-206ENST00000473869 TCHHQ07283 1943 aa12.62□□□□□ -0.39
TARDBP-206ENST00000473869 STK36Q9NRP7 1315 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
TARDBP-206ENST00000473869 KIF5BP33176 963 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 SHMT1P34896 483 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 AKAP17AQ02040 695 aaKnown RBP12.61□□□□□ -0.39
TARDBP-206ENST00000473869 FKBP1CQ5VVH2 108 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 CCDC17Q96LX7 622 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 ALG1Q9BT22 464 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 VEZTQ9HBM0 779 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 ATRNL1Q5VV63 1379 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 PLIN4Q96Q06 1357 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 COL2A1P02458 1487 aaPredicted RBP12.61□□□□□ -0.39
TARDBP-206ENST00000473869 SBF1O95248 1867 aa12.61□□□□□ -0.39
TARDBP-206ENST00000473869 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 FBXO18Q8NFZ0 1043 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 DPF2Q92785 391 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 CSRNP1Q96S65 589 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 MAP3K14Q99558 947 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 TMEM47Q9BQJ4 181 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 MPHOSPH10O00566 681 aaKnown RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 WNT10BO00744 389 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 TRAK2O60296 914 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 PRPF40AO75400 957 aaKnown RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 DEXIO95424 95 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 TOP1P11387 765 aaKnown RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 AKR1B1P15121 316 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 GMPSP49915 693 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 ZNF280AP59817 542 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 TRIM29Q14134 588 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 SKOR2Q2VWA4 1001 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 CMTR1Q8N1G2 835 aaKnown RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 RGS22Q8NE09 1264 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 FAM151AQ8WW52 585 aa12.6□□□□□ -0.39
TARDBP-206ENST00000473869 ZBED3Q96IU2 234 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-206ENST00000473869 GRIN3BO60391 1043 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 DNM1Q05193 864 aaKnown RBP12.59□□□□□ -0.39
TARDBP-206ENST00000473869 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 NBPF9Q3BBW0 867 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-206ENST00000473869 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 MICALL2Q8IY33 904 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 RNF26Q9BY78 433 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-206ENST00000473869 MTMR4Q9NYA4 1195 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 CNOT7Q9UIV1 285 aaKnown RBP12.59□□□□□ -0.39
TARDBP-206ENST00000473869 MYH6P13533 1939 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 DICER1Q9UPY3 1922 aaKnown RBP12.59□□□□□ -0.39
TARDBP-206ENST00000473869 SIPA1L1O43166 1804 aa12.59□□□□□ -0.39
TARDBP-206ENST00000473869 SHTN1A0MZ66 631 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 PLEKHA8P1O95397 391 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 TTLL1O95922 423 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 GNAQP50148 359 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 KRT85P78386 507 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 RESTQ13127 1097 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.39
TARDBP-206ENST00000473869 NBPF11Q86T75 865 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 FAM83AQ86UY5 434 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 AIFM3Q96NN9 605 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.58□□□□□ -0.39
TARDBP-206ENST00000473869 DNAJC18Q9H819 358 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 LMBRD1Q9NUN5 540 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 HERC5Q9UII4 1024 aaKnown RBP12.58□□□□□ -0.39
TARDBP-206ENST00000473869 CNPY2Q9Y2B0 182 aa12.58□□□□□ -0.39
TARDBP-206ENST00000473869 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
TARDBP-206ENST00000473869 NOVP48745 357 aa12.58□□□□□ -0.4
TARDBP-206ENST00000473869 TNNI2P48788 182 aa12.58□□□□□ -0.4
TARDBP-206ENST00000473869 GRM4Q14833 912 aa12.58□□□□□ -0.4
TARDBP-206ENST00000473869 OTUD7BQ6GQQ9 843 aa12.58□□□□□ -0.4
TARDBP-206ENST00000473869 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
TARDBP-206ENST00000473869 MTMR7Q9Y216 660 aa12.58□□□□□ -0.4
TARDBP-206ENST00000473869 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 H7C1D1 291 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
TARDBP-206ENST00000473869 FIBPO43427 364 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 XBP1P17861 261 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 FUT2Q10981 343 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 TNFAIP1Q13829 316 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 KRT40Q6A162 431 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 TATDN1Q6P1N9 297 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
TARDBP-206ENST00000473869 GDPD2Q9HCC8 539 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
TARDBP-206ENST00000473869 CNTNAP1P78357 1384 aa12.57□□□□□ -0.4
TARDBP-206ENST00000473869 SLURP2P0DP57 97 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 GUCY1A2P33402 732 aa12.56□□□□□ -0.4
TARDBP-206ENST00000473869 GNL2Q13823 731 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms