RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CCDC30Q5VVM6 783 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 TMCO3Q6UWJ1 677 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 FILIP1Q7Z7B0 1213 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 TADA2BQ86TJ2 420 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 PMEPA1Q969W9 287 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 KCNH4Q9UQ05 1017 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 UNC13BO14795 1591 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 FAM157BP0CG42 384 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 VEGFBP49765 207 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 PDCD2Q16342 344 aaPredicted RBP5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 RINLQ6ZS11 566 aa5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 TMX4Q9H1E5 349 aaPredicted RBP5.95□□□□□ -1.46
TMEM39A-206ENST00000473684 GPRASP1Q5JY77 1395 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 USP31Q70CQ4 1352 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 POLR3GO15318 223 aaPredicted RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 CCP110O43303 1012 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 SCP2P22307 547 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 PAX7P23759 505 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 EIF5P55010 431 aaKnown RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 UBAP2LQ14157 1087 aaKnown RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 CRYMQ14894 314 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 NAIF1Q69YI7 327 aaPredicted RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 TTLL5Q6EMB2 1281 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 GBP6Q6ZN66 633 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 CCDC26Q8TAB7 109 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 TSPAN18Q96SJ8 248 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 GSX2Q9BZM3 304 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 SRCIN1Q9C0H9 1055 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 FAM8A1Q9UBU6 413 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 NEBLO76041 1014 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 GCFC2P16383 781 aaKnown RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 ELF1P32519 619 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 SFSWAPQ12872 951 aaKnown RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 TPD52L1Q16890 204 aaPredicted RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 CCDC183Q5T5S1 534 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 FIGNL1Q6PIW4 674 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 BCO2Q9BYV7 579 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 TRIM6Q9C030 488 aaPredicted RBP5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 VEZTQ9HBM0 779 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 TRAK1Q9UPV9 953 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 KNDC1Q76NI1 1749 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 RALGAPBQ86X10 1494 aa5.94□□□□□ -1.46
TMEM39A-206ENST00000473684 XRN1Q8IZH2 1706 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 NRG2O14511 850 aaPredicted RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 ATXN7O15265 892 aaPredicted RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 MAN1A2O60476 641 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 KINO60870 393 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 BCAR3O75815 825 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 SASH3O75995 380 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 OAS2P29728 719 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 PTPN12Q05209 780 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 GRIK3Q13003 919 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 TTC39BQ5VTQ0 682 aaPredicted RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 TTC19Q6DKK2 380 aaPredicted RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 REXO1L1PQ8IX06 675 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 TMTC2Q8N394 836 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 MPHOSPH9Q99550 1183 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 UTP14AQ9BVJ6 771 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 SPATS2LQ9NUQ6 558 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 IRAK4Q9NWZ3 460 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 CPSF2Q9P2I0 782 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 CT47B1P0C2W7 299 aaPredicted RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 CES1P23141 567 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 MAGEA8P43361 318 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 LMAN1P49257 510 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 RBM5P52756 815 aaKnown RBP eCLIP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 CCT2P78371 535 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 CCINQ13939 588 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 WDR43Q15061 677 aaKnown RBP eCLIP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 RBBP5Q15291 538 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 NXPE4Q6UWF7 544 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 TINF2Q9BSI4 451 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 ATP13A2Q9NQ11 1180 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 NSFL1CQ9UNZ2 370 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 PCDHGC4Q9Y5F7 938 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 NEMFO60524 1076 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 CAND2O75155 1236 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 PPFIA2O75334 1257 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 TUBB4AP04350 444 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 HSP90AB4PQ58FF6 505 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 DDX11Q96FC9 970 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 SUV39H2Q9H5I1 410 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 SMC3Q9UQE7 1217 aa5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.93□□□□□ -1.46
TMEM39A-206ENST00000473684 SLC35F4A4IF30 521 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 POTECB2RU33 542 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 GADD45BO75293 160 aaPredicted RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 USP17L7P0C7H9 530 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 TARSP26639 723 aaKnown RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 CD151P48509 253 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 ST13P50502 369 aaKnown RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 TNP2Q05952 138 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 GRM2Q14416 872 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 SF3A1Q15459 793 aaKnown RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 TAF1CQ15572 869 aaPredicted RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 PTPN14Q15678 1187 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 MEI1Q5TIA1 1274 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 KIAA0319Q5VV43 1072 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms