RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SEC23AQ15436 765 aa24.06■■□□□ 1.44
COL18A1-207ENST00000473212 PKN1Q16512 942 aa24.06■■□□□ 1.44
COL18A1-207ENST00000473212 IRX2Q9BZI1 471 aaPredicted RBP24.06■■□□□ 1.44
COL18A1-207ENST00000473212 TAF1P21675 1872 aa24.06■■□□□ 1.44
COL18A1-207ENST00000473212 PNPLA7Q6ZV29 1317 aa24.06■■□□□ 1.44
COL18A1-207ENST00000473212 POLR3GO15318 223 aaPredicted RBP24.06■■□□□ 1.44
COL18A1-207ENST00000473212 C3orf67Q6ZVT6 689 aa24.06■■□□□ 1.44
COL18A1-207ENST00000473212 ADAMTS3O15072 1205 aa24.05■■□□□ 1.44
COL18A1-207ENST00000473212 SASH3O75995 380 aa24.05■■□□□ 1.44
COL18A1-207ENST00000473212 ENAHQ8N8S7 591 aaPredicted RBP24.05■■□□□ 1.44
COL18A1-207ENST00000473212 TRIML1Q8N9V2 468 aa24.05■■□□□ 1.44
COL18A1-207ENST00000473212 ZNF579Q8NAF0 562 aaKnown RBP24.05■■□□□ 1.44
COL18A1-207ENST00000473212 BAZ2AQ9UIF9 1905 aaKnown RBP24.05■■□□□ 1.44
COL18A1-207ENST00000473212 MYH6P13533 1939 aa24.05■■□□□ 1.44
COL18A1-207ENST00000473212 EXOC5O00471 708 aa24.05■■□□□ 1.44
COL18A1-207ENST00000473212 CRKLP46109 303 aaKnown RBP24.05■■□□□ 1.44
COL18A1-207ENST00000473212 PLCD1P51178 756 aa24.05■■□□□ 1.44
COL18A1-207ENST00000473212 GPR161Q8N6U8 529 aaKnown RBP24.05■■□□□ 1.44
COL18A1-207ENST00000473212 MRPL44Q9H9J2 332 aaKnown RBP24.05■■□□□ 1.44
COL18A1-207ENST00000473212 NIP7Q9Y221 180 aaKnown RBP eCLIP24.05■■□□□ 1.44
COL18A1-207ENST00000473212 BCORQ6W2J9 1755 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 STRCQ7RTU9 1775 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 NID2Q14112 1375 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 CYP2C19P33261 490 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 CC2D1AQ6P1N0 951 aaPredicted RBP24.04■■□□□ 1.44
COL18A1-207ENST00000473212 SMIM5Q71RC9 77 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 CREBRFQ8IUR6 639 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 DISP2A7MBM2 1401 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 TBC1D8O95759 1140 aa24.04■■□□□ 1.44
COL18A1-207ENST00000473212 RSRC2Q7L4I2 434 aaKnown RBP24.04■■□□□ 1.44
COL18A1-207ENST00000473212 V9GY48 417 aaPredicted RBP24.04■■□□□ 1.44
COL18A1-207ENST00000473212 COL1A1P02452 1464 aaPredicted RBP24.03■■□□□ 1.44
COL18A1-207ENST00000473212 SOWAHDA6NJG2 315 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 IGHMBP2P38935 993 aaKnown RBP24.03■■□□□ 1.44
COL18A1-207ENST00000473212 KANK3Q6NY19 840 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 ZNF384Q8TF68 577 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 A0A1B0GTH6 734 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 NMT2O60551 498 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 CAMTA2O94983 1202 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 VEGFAP15692 232 aaPredicted RBP24.03■■□□□ 1.44
COL18A1-207ENST00000473212 ATP6V1AP38606 617 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 SPATA20Q8TB22 786 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 CCDC12Q8WUD4 166 aaPredicted RBP24.03■■□□□ 1.44
COL18A1-207ENST00000473212 CPLX3Q8WVH0 158 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 CEP131Q9UPN4 1083 aa24.03■■□□□ 1.44
COL18A1-207ENST00000473212 AKR1B15C9JRZ8 316 aaPredicted RBP24.02■■□□□ 1.44
COL18A1-207ENST00000473212 ITPK1Q13572 414 aa24.02■■□□□ 1.44
COL18A1-207ENST00000473212 NTSR2O95665 410 aa24.02■■□□□ 1.44
COL18A1-207ENST00000473212 ERCC5P28715 1186 aaPredicted RBP24.02■■□□□ 1.44
COL18A1-207ENST00000473212 FUT2Q10981 343 aa24.02■■□□□ 1.44
COL18A1-207ENST00000473212 ZNF174Q15697 407 aa24.02■■□□□ 1.44
COL18A1-207ENST00000473212 SLC4A8Q2Y0W8 1093 aa24.02■■□□□ 1.44
COL18A1-207ENST00000473212 CCDC152Q4G0S7 254 aa24.02■■□□□ 1.44
COL18A1-207ENST00000473212 SYMPKQ92797 1274 aaKnown RBP24.02■■□□□ 1.44
COL18A1-207ENST00000473212 PARD6BQ9BYG5 372 aa24.02■■□□□ 1.44
COL18A1-207ENST00000473212 ATP8B1O43520 1251 aa24.01■■□□□ 1.43
COL18A1-207ENST00000473212 GNAT2P19087 354 aa24.01■■□□□ 1.43
COL18A1-207ENST00000473212 APTXQ7Z2E3 356 aaKnown RBP24.01■■□□□ 1.43
COL18A1-207ENST00000473212 LZTFL1Q9NQ48 299 aa24.01■■□□□ 1.43
COL18A1-207ENST00000473212 CCDC87Q9NVE4 849 aa24.01■■□□□ 1.43
COL18A1-207ENST00000473212 MAGEB6P1A0A0J9YX57 407 aa24.01■■□□□ 1.43
COL18A1-207ENST00000473212 CCDC196A0A1B0GTZ2 297 aa24.01■■□□□ 1.43
COL18A1-207ENST00000473212 DPYDQ12882 1025 aa24.01■■□□□ 1.43
COL18A1-207ENST00000473212 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.01■■□□□ 1.43
COL18A1-207ENST00000473212 CICQ96RK0 1608 aaPredicted RBP24■■□□□ 1.43
COL18A1-207ENST00000473212 CCDC175P0C221 793 aa24■■□□□ 1.43
COL18A1-207ENST00000473212 CCDC34Q96HJ3 373 aa24■■□□□ 1.43
COL18A1-207ENST00000473212 RIOK1Q9BRS2 568 aaKnown RBP24■■□□□ 1.43
COL18A1-207ENST00000473212 MYH14Q7Z406 1995 aaKnown RBP24■■□□□ 1.43
COL18A1-207ENST00000473212 RBL2Q08999 1139 aa24■■□□□ 1.43
COL18A1-207ENST00000473212 UBXN6Q9BZV1 441 aa24■■□□□ 1.43
COL18A1-207ENST00000473212 ZSWIM4Q9H7M6 989 aa24■■□□□ 1.43
COL18A1-207ENST00000473212 ZCCHC17Q9NP64 241 aaKnown RBP24■■□□□ 1.43
COL18A1-207ENST00000473212 TRIM75PA6NK02 468 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 KLRK1P26718 216 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 KCNQ4P56696 695 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 RAD9BQ6WBX8 426 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 IGSF22Q8N9C0 903 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 RABGGTAQ92696 567 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 GOLGA1Q92805 767 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 PANX2Q96RD6 677 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 NPY5RQ15761 445 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 ESR2Q92731 530 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 PAGE5Q96GU1 130 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 ZSCAN10Q96SZ4 725 aaPredicted RBP23.99■■□□□ 1.43
COL18A1-207ENST00000473212 PHF20Q9BVI0 1012 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 RNF41Q9H4P4 317 aaPredicted RBP23.99■■□□□ 1.43
COL18A1-207ENST00000473212 ARFGAP3Q9NP61 516 aa23.99■■□□□ 1.43
COL18A1-207ENST00000473212 BCL9LQ86UU0 1499 aa23.98■■□□□ 1.43
COL18A1-207ENST00000473212 SPATA1Q5VX52 437 aa23.98■■□□□ 1.43
COL18A1-207ENST00000473212 PPFIBP1Q86W92 1011 aa23.98■■□□□ 1.43
COL18A1-207ENST00000473212 TMTC2Q8N394 836 aa23.98■■□□□ 1.43
COL18A1-207ENST00000473212 RNF26Q9BY78 433 aaPredicted RBP23.98■■□□□ 1.43
COL18A1-207ENST00000473212 BLZF1Q9H2G9 400 aa23.98■■□□□ 1.43
COL18A1-207ENST00000473212 OAS2P29728 719 aaKnown RBP23.98■■□□□ 1.43
COL18A1-207ENST00000473212 AKAP17AQ02040 695 aaKnown RBP23.98■■□□□ 1.43
COL18A1-207ENST00000473212 ZBTB9Q96C00 473 aa23.98■■□□□ 1.43
COL18A1-207ENST00000473212 AATFQ9NY61 560 aaKnown RBP eCLIP23.98■■□□□ 1.43
COL18A1-207ENST00000473212 ADGRG1Q9Y653 693 aa23.98■■□□□ 1.43
COL18A1-207ENST00000473212 SYNRGQ9UMZ2 1314 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms