RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 SMARCC1Q92922 1105 aaPredicted RBP5.3□□□□□ -1.56
CLCC1-208ENST00000473062 MIPEPQ99797 713 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 PHAXQ9H814 394 aaKnown RBP5.3□□□□□ -1.56
CLCC1-208ENST00000473062 CNNM2Q9H8M5 875 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 MKNK2Q9HBH9 465 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 KCNH3Q9ULD8 1083 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 TPX2Q9ULW0 747 aaKnown RBP5.3□□□□□ -1.56
CLCC1-208ENST00000473062 PPT2Q9UMR5 302 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 LEMD3Q9Y2U8 911 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 CORINQ9Y5Q5 1042 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 SLC22A31A6NKX4 558 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 TNFRSF10CO14798 259 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 RGS13O14921 159 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 FAM87AP0C7U9 286 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 GIPRP48546 466 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 RBM10P98175 930 aaKnown RBP5.29□□□□□ -1.56
CLCC1-208ENST00000473062 RSPO4Q2I0M5 234 aaPredicted RBP5.29□□□□□ -1.56
CLCC1-208ENST00000473062 ARSHQ5FYA8 562 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 NKAPLQ5M9Q1 402 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 INTS5Q6P9B9 1019 aaKnown RBP5.29□□□□□ -1.56
CLCC1-208ENST00000473062 SEZ6L2Q6UXD5 910 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 FBXL6Q8N531 539 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 TOP6BLQ8N6T0 577 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 UBXN4Q92575 508 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 ANAPC16Q96DE5 110 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 DUSP23Q9BVJ7 150 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 ASPNQ9BXN1 380 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 FBRSQ9HAH7 460 aa5.29□□□□□ -1.56
CLCC1-208ENST00000473062 CLEC3AO75596 197 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 ITGB2P05107 769 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 NME1P15531 152 aaKnown RBP5.28□□□□□ -1.56
CLCC1-208ENST00000473062 CDK5R2Q13319 367 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 SFRP5Q5T4F7 317 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 C22orf34Q6ZV56 151 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 LSRQ86X29 649 aaPredicted RBP5.28□□□□□ -1.56
CLCC1-208ENST00000473062 MCF2L2Q86YR7 1114 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 RNF141Q8WVD5 230 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 MFSD14AQ96MC6 490 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 ASCC2Q9H1I8 757 aaPredicted RBP5.28□□□□□ -1.56
CLCC1-208ENST00000473062 C1GALT1Q9NS00 363 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 PRKAG3Q9UGI9 489 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 CEP131Q9UPN4 1083 aa5.28□□□□□ -1.56
CLCC1-208ENST00000473062 WDR64B1ANS9 1081 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 K7ELQ4 463 aaPredicted RBP5.27□□□□□ -1.57
CLCC1-208ENST00000473062 CASP7P55210 303 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 NKG7Q16617 165 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 PIWIL2Q8TC59 973 aaKnown RBP5.27□□□□□ -1.57
CLCC1-208ENST00000473062 SHDQ96IW2 340 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 TRIM55Q9BYV6 548 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 LGR6Q9HBX8 967 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 ACTR10Q9NZ32 417 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 PIM2Q9P1W9 311 aa5.27□□□□□ -1.57
CLCC1-208ENST00000473062 FAM155AB1AL88 458 aaPredicted RBP5.26□□□□□ -1.57
CLCC1-208ENST00000473062 CYP26A1O43174 497 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 NCAPHQ15003 741 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 FXNQ16595 210 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 CCDC81Q6ZN84 652 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 STK11IPQ8N1F8 1099 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 SHKBP1Q8TBC3 707 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 XAGE3Q8WTP9 111 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 MISP3Q96FF7 219 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 DPH2Q9BQC3 489 aaPredicted RBP5.26□□□□□ -1.57
CLCC1-208ENST00000473062 SEMA6BQ9H3T3 888 aa5.26□□□□□ -1.57
CLCC1-208ENST00000473062 CHURC1-FNTBB4DL54 471 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 DYNC1LI2O43237 492 aaPredicted RBP5.25□□□□□ -1.57
CLCC1-208ENST00000473062 FOSL1P15407 271 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 GTF2F1P35269 517 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLCC1-208ENST00000473062 CLCN7P51798 805 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 PMS1P54277 932 aaKnown RBP5.25□□□□□ -1.57
CLCC1-208ENST00000473062 PPP2R5EQ16537 467 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 ZNF765Q7L2R6 523 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 MFSD4AQ8N468 514 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 FBXL18Q96ME1 805 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 KIF2CQ99661 725 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 TRIT1Q9H3H1 467 aaKnown RBP5.25□□□□□ -1.57
CLCC1-208ENST00000473062 PRR13Q9NZ81 148 aa5.25□□□□□ -1.57
CLCC1-208ENST00000473062 TMEM265A0A087WTH1 108 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 UPK3BL1B0FP48 263 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 UPK3BL2E5RIL1 263 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 COBLO75128 1261 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 SLITRK5O94991 958 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 F13BP05160 661 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 FURINP09958 794 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 ZNF865P0CJ78 1059 aaPredicted RBP5.24□□□□□ -1.57
CLCC1-208ENST00000473062 ENDOUP21128 410 aaKnown RBP5.24□□□□□ -1.57
CLCC1-208ENST00000473062 ZNF143P52747 638 aaPredicted RBP5.24□□□□□ -1.57
CLCC1-208ENST00000473062 IFI16Q16666 785 aaKnown RBP5.24□□□□□ -1.57
CLCC1-208ENST00000473062 UBE3DQ7Z6J8 389 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 TTC6Q86TZ1 520 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 ZDHHC13Q8IUH4 622 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 DNAJB8Q8NHS0 232 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 GATA6Q92908 595 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 KREMEN1Q96MU8 473 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 MKRN2Q9H000 416 aaKnown RBP5.24□□□□□ -1.57
CLCC1-208ENST00000473062 GBP3Q9H0R5 595 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 ZNF408Q9H9D4 720 aa5.24□□□□□ -1.57
CLCC1-208ENST00000473062 SUCOQ9UBS9 1254 aaKnown RBP5.24□□□□□ -1.57
CLCC1-208ENST00000473062 RNF112Q9ULX5 631 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms