RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 TMEM179Q6ZVK1 233 aa20.43■□□□□ 0.86
COMMD3-210ENST00000472610 C16orf86Q6ZW13 317 aa20.43■□□□□ 0.86
COMMD3-210ENST00000472610 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
COMMD3-210ENST00000472610 ARMC5Q96C12 935 aa20.43■□□□□ 0.86
COMMD3-210ENST00000472610 EMILIN3Q9NT22 766 aa20.43■□□□□ 0.86
COMMD3-210ENST00000472610 CYP2D7A0A087X1C5 515 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 GUCY1A2P33402 732 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 SOX10P56693 466 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 MLLT1Q03111 559 aaPredicted RBP20.42■□□□□ 0.86
COMMD3-210ENST00000472610 SEPT2Q15019 361 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 SLC9C1Q4G0N8 1177 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 ZMYM1Q5SVZ6 1142 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 CHD1LQ86WJ1 897 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 ANKRD13CQ8N6S4 541 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 SLC44A5Q8NCS7 719 aa20.42■□□□□ 0.86
COMMD3-210ENST00000472610 PATL2C9JE40 543 aaKnown RBP20.41■□□□□ 0.86
COMMD3-210ENST00000472610 M0R2C6 588 aa20.41■□□□□ 0.86
COMMD3-210ENST00000472610 ECM2O94769 699 aaPredicted RBP20.41■□□□□ 0.86
COMMD3-210ENST00000472610 APPP05067 770 aa20.41■□□□□ 0.86
COMMD3-210ENST00000472610 NUCB1Q02818 461 aa20.41■□□□□ 0.86
COMMD3-210ENST00000472610 GTF3C2Q8WUA4 911 aaPredicted RBP20.41■□□□□ 0.86
COMMD3-210ENST00000472610 NACAP1Q9BZK3 213 aa20.41■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L15C9J2P7 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L13C9JLJ4 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L11C9JVI0 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L18D6R9N7 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L22D6RA61 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L17D6RBQ6 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L19D6RCP7 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L20D6RJB6 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 USP17L24Q0WX57 530 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 ZYXQ15942 572 aaKnown RBP20.4■□□□□ 0.86
COMMD3-210ENST00000472610 MYPNQ86TC9 1320 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 ACER1Q8TDN7 264 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 P2RX7Q99572 595 aaKnown RBP20.4■□□□□ 0.86
COMMD3-210ENST00000472610 MORF4L1Q9UBU8 362 aa20.4■□□□□ 0.86
COMMD3-210ENST00000472610 TDO2P48775 406 aa20.39■□□□□ 0.85
COMMD3-210ENST00000472610 HERVK_113P62684 666 aa20.39■□□□□ 0.85
COMMD3-210ENST00000472610 RAET1EQ8TD07 263 aa20.39■□□□□ 0.85
COMMD3-210ENST00000472610 SEC62Q99442 399 aaKnown RBP20.39■□□□□ 0.85
COMMD3-210ENST00000472610 MINDY4BA8MYZ0 360 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 TNPO2O14787 897 aaKnown RBP20.38■□□□□ 0.85
COMMD3-210ENST00000472610 AKR1B1P15121 316 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 IFNL3Q8IZI9 196 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 COA7Q96BR5 231 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 ZNF333Q96JL9 665 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 SH2D4AQ9H788 454 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 ZNF287Q9HBT7 754 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 ARHGEF10LQ9HCE6 1279 aa20.38■□□□□ 0.85
COMMD3-210ENST00000472610 SMIM22K7EJ46 135 aa20.37■□□□□ 0.85
COMMD3-210ENST00000472610 CATSPERGQ6ZRH7 1159 aa20.37■□□□□ 0.85
COMMD3-210ENST00000472610 TMEM106CQ9BVX2 250 aa20.37■□□□□ 0.85
COMMD3-210ENST00000472610 MKNK2Q9HBH9 465 aa20.37■□□□□ 0.85
COMMD3-210ENST00000472610 HELLSQ9NRZ9 838 aa20.37■□□□□ 0.85
COMMD3-210ENST00000472610 ROBO3Q96MS0 1386 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 A0A1W2PRG0 241 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 VCAM1P19320 739 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 ICA1Q05084 483 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 PRKCZQ05513 592 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 PLEKHM2Q8IWE5 1019 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 GPRC5AQ8NFJ5 357 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 KANSL2Q9H9L4 492 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 EPB41L4AQ9HCS5 686 aaPredicted RBP20.36■□□□□ 0.85
COMMD3-210ENST00000472610 TMX2Q9Y320 296 aa20.36■□□□□ 0.85
COMMD3-210ENST00000472610 GRK4P32298 578 aa20.35■□□□□ 0.85
COMMD3-210ENST00000472610 LPAR1Q92633 364 aa20.35■□□□□ 0.85
COMMD3-210ENST00000472610 NAPBQ9H115 298 aa20.35■□□□□ 0.85
COMMD3-210ENST00000472610 RBPJLQ9UBG7 517 aa20.35■□□□□ 0.85
COMMD3-210ENST00000472610 RBBP6Q7Z6E9 1792 aaKnown RBP20.35■□□□□ 0.85
COMMD3-210ENST00000472610 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
COMMD3-210ENST00000472610 FLT3LGP49771 235 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 IRX6P78412 446 aaPredicted RBP20.34■□□□□ 0.85
COMMD3-210ENST00000472610 IRF5Q13568 498 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 SIAH1Q8IUQ4 282 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 SLAIN1Q8ND83 568 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 SH3TC2Q8TF17 1288 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 RILPL2Q969X0 211 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 RPAP3Q9H6T3 665 aaPredicted RBP20.34■□□□□ 0.85
COMMD3-210ENST00000472610 GABRQQ9UN88 632 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 RABGAP1Q9Y3P9 1069 aa20.34■□□□□ 0.85
COMMD3-210ENST00000472610 RASA1P20936 1047 aa20.33■□□□□ 0.85
COMMD3-210ENST00000472610 LBX2Q6XYB7 198 aa20.33■□□□□ 0.85
COMMD3-210ENST00000472610 ZNF444Q8N0Y2 327 aaPredicted RBP20.33■□□□□ 0.85
COMMD3-210ENST00000472610 PXYLP1Q8TE99 480 aa20.33■□□□□ 0.85
COMMD3-210ENST00000472610 HOXC10Q9NYD6 342 aa20.33■□□□□ 0.85
COMMD3-210ENST00000472610 EEF2P13639 858 aaKnown RBP20.32■□□□□ 0.84
COMMD3-210ENST00000472610 ERVK-9P63128 1117 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 ERVK-24P63145 666 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 UBXN2AP68543 259 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 PDE4BQ07343 736 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 COG2Q14746 738 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 MCMDC2Q4G0Z9 681 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 CCAR1Q8IX12 1150 aaKnown RBP20.32■□□□□ 0.84
COMMD3-210ENST00000472610 STK11IPQ8N1F8 1099 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 PAGR1Q9BTK6 254 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 VCPKMTQ9H867 229 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 TXNRD2Q9NNW7 524 aa20.32■□□□□ 0.84
COMMD3-210ENST00000472610 BIN2Q9UBW5 565 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms