RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 CCNA1P78396 465 aa16.92■□□□□ 0.3
RTKN-207ENST00000472518 USP17L24Q0WX57 530 aa16.92■□□□□ 0.3
RTKN-207ENST00000472518 CCAR1Q8IX12 1150 aaKnown RBP16.92■□□□□ 0.3
RTKN-207ENST00000472518 ANKLE1Q8NAG6 615 aa16.92■□□□□ 0.3
RTKN-207ENST00000472518 DNAJC2Q99543 621 aaKnown RBP16.92■□□□□ 0.3
RTKN-207ENST00000472518 P2RX7Q99572 595 aaKnown RBP16.92■□□□□ 0.3
RTKN-207ENST00000472518 PAG1Q9NWQ8 432 aa16.92■□□□□ 0.3
RTKN-207ENST00000472518 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
RTKN-207ENST00000472518 NDUFB9Q9Y6M9 179 aa16.92■□□□□ 0.3
RTKN-207ENST00000472518 ZNF532Q9HCE3 1301 aa16.92■□□□□ 0.3
RTKN-207ENST00000472518 JAG1P78504 1218 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 GABPAQ06546 454 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 ZSCAN25Q6NSZ9 544 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 LBX2Q6XYB7 198 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 AMOTL1Q8IY63 956 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 DPF3Q92784 378 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 NUDT12Q9BQG2 462 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 GJD2Q9UKL4 321 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 NR2E3Q9Y5X4 410 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 RPTORQ8N122 1335 aa16.91■□□□□ 0.3
RTKN-207ENST00000472518 TCRBV5S4A2TA0A5A2 114 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 APBB1O00213 710 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 SOX1O00570 391 aaPredicted RBP16.9■□□□□ 0.3
RTKN-207ENST00000472518 GLRX3O76003 335 aaKnown RBP16.9■□□□□ 0.3
RTKN-207ENST00000472518 SHMT1P34896 483 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 ERVK-9P63128 1117 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 ERVK-24P63145 666 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 HAUS7Q99871 368 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 CRISPLD2Q9H0B8 497 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.35e-6■■□□□ 14.5
RTKN-207ENST00000472518 PLXNB2O15031 1838 aa16.9■□□□□ 0.3
RTKN-207ENST00000472518 SPTBN5Q9NRC6 3674 aaKnown RBP16.9■□□□□ 0.3
RTKN-207ENST00000472518 EYSQ5T1H1 3165 aa16.89■□□□□ 0.3
RTKN-207ENST00000472518 TFRCP02786 760 aaKnown RBP16.89■□□□□ 0.29
RTKN-207ENST00000472518 ADD2P35612 726 aa16.89■□□□□ 0.29
RTKN-207ENST00000472518 PLCD1P51178 756 aa16.89■□□□□ 0.29
RTKN-207ENST00000472518 UBE3CQ15386 1083 aa16.89■□□□□ 0.29
RTKN-207ENST00000472518 DEFB118Q96PH6 123 aa16.89■□□□□ 0.29
RTKN-207ENST00000472518 HMX1Q9NP08 348 aaPredicted RBP16.89■□□□□ 0.29
RTKN-207ENST00000472518 DCP1AQ9NPI6 582 aaPredicted RBP16.89■□□□□ 0.29
RTKN-207ENST00000472518 RBPJLQ9UBG7 517 aa16.89■□□□□ 0.29
RTKN-207ENST00000472518 RGS2P41220 211 aa16.88■□□□□ 0.29
RTKN-207ENST00000472518 CATSPERGQ6ZRH7 1159 aa16.88■□□□□ 0.29
RTKN-207ENST00000472518 TMEM179Q6ZVK1 233 aa16.88■□□□□ 0.29
RTKN-207ENST00000472518 GPATCH3Q96I76 525 aa16.88■□□□□ 0.29
RTKN-207ENST00000472518 SH2D4AQ9H788 454 aa16.88■□□□□ 0.29
RTKN-207ENST00000472518 VCAM1P19320 739 aa16.87■□□□□ 0.29
RTKN-207ENST00000472518 SHROOM1Q2M3G4 852 aaPredicted RBP16.87■□□□□ 0.29
RTKN-207ENST00000472518 PLEKHH3Q7Z736 793 aa16.87■□□□□ 0.29
RTKN-207ENST00000472518 CCDC17Q96LX7 622 aa16.87■□□□□ 0.29
RTKN-207ENST00000472518 BOLA2Q9H3K6 86 aa16.87■□□□□ 0.29
RTKN-207ENST00000472518 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
RTKN-207ENST00000472518 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
RTKN-207ENST00000472518 DNAH12Q6ZR08 3092 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
RTKN-207ENST00000472518 MAP3K21Q5TCX8 1036 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 GPR142Q7Z601 462 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 NECAB2Q7Z6G3 386 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 LCORLQ8N3X6 602 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 SDR42E1Q8WUS8 393 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 LPAR1Q92633 364 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 APBA2Q99767 749 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 PAGR1Q9BTK6 254 aa16.86■□□□□ 0.29
RTKN-207ENST00000472518 BAZ2AQ9UIF9 1905 aaKnown RBP16.86■□□□□ 0.29
RTKN-207ENST00000472518 MBD4O95243 580 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
RTKN-207ENST00000472518 TRIB2Q92519 343 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 USP6NLQ92738 828 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 LRCH3Q96II8 777 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 ARHGEF10LQ9HCE6 1279 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 HOXC10Q9NYD6 342 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 ALPK3Q96L96 1907 aa16.85■□□□□ 0.29
RTKN-207ENST00000472518 DLL1O00548 723 aa16.84■□□□□ 0.29
RTKN-207ENST00000472518 MPHOSPH10O00566 681 aaKnown RBP16.84■□□□□ 0.29
RTKN-207ENST00000472518 CYP2B6P20813 491 aa16.84■□□□□ 0.29
RTKN-207ENST00000472518 SEPT2Q15019 361 aa16.84■□□□□ 0.29
RTKN-207ENST00000472518 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
RTKN-207ENST00000472518 MORN1Q5T089 497 aa16.84■□□□□ 0.29
RTKN-207ENST00000472518 MB21D1Q8N884 522 aa16.84■□□□□ 0.29
RTKN-207ENST00000472518 ARMT1Q9H993 441 aa16.84■□□□□ 0.29
RTKN-207ENST00000472518 IVNS1ABPQ9Y6Y0 642 aa16.84■□□□□ 0.29
RTKN-207ENST00000472518 A0A1W2PPC1 479 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 SLC15A5A6NIM6 579 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 EVI5O60447 810 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
RTKN-207ENST00000472518 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 COG2Q14746 738 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 Q3C1V9 767 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 ACER1Q8TDN7 264 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 PORCNQ9H237 461 aa16.83■□□□□ 0.28
RTKN-207ENST00000472518 RPAP3Q9H6T3 665 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms