RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 CEP131Q9UPN4 1083 aa11.22□□□□□ -0.61
SGCE-210ENST00000472326 POLR2BP30876 1174 aaKnown RBP11.21□□□□□ -0.61
SGCE-210ENST00000472326 NKPD1Q17RQ9 610 aa11.21□□□□□ -0.61
SGCE-210ENST00000472326 FBXW10Q5XX13 1052 aa11.21□□□□□ -0.61
SGCE-210ENST00000472326 CCDC74BQ96LY2 380 aa11.21□□□□□ -0.61
SGCE-210ENST00000472326 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.61
SGCE-210ENST00000472326 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.61
SGCE-210ENST00000472326 RAG1P15918 1043 aa11.2□□□□□ -0.62
SGCE-210ENST00000472326 BNIP3Q12983 259 aa11.2□□□□□ -0.62
SGCE-210ENST00000472326 IFI16Q16666 785 aaKnown RBP11.2□□□□□ -0.62
SGCE-210ENST00000472326 ZNF746Q6NUN9 644 aaPredicted RBP11.2□□□□□ -0.62
SGCE-210ENST00000472326 CCDC81Q6ZN84 652 aa11.2□□□□□ -0.62
SGCE-210ENST00000472326 SPACA3Q8IXA5 215 aa11.2□□□□□ -0.62
SGCE-210ENST00000472326 ATG4CQ96DT6 458 aa11.2□□□□□ -0.62
SGCE-210ENST00000472326 FERD3LQ96RJ6 166 aa11.2□□□□□ -0.62
SGCE-210ENST00000472326 INPP5FQ9Y2H2 1132 aa11.2□□□□□ -0.62
SGCE-210ENST00000472326 CD96P40200 585 aa11.19□□□□□ -0.62
SGCE-210ENST00000472326 ETV3P41162 512 aa11.19□□□□□ -0.62
SGCE-210ENST00000472326 GJA8P48165 433 aa11.19□□□□□ -0.62
SGCE-210ENST00000472326 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
SGCE-210ENST00000472326 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
SGCE-210ENST00000472326 PRNPP04156 253 aa11.18□□□□□ -0.62
SGCE-210ENST00000472326 CYP7A1P22680 504 aa11.18□□□□□ -0.62
SGCE-210ENST00000472326 GBP1P32455 592 aa11.18□□□□□ -0.62
SGCE-210ENST00000472326 ZNF574Q6ZN55 896 aaPredicted RBP11.18□□□□□ -0.62
SGCE-210ENST00000472326 MFSD4AQ8N468 514 aa11.18□□□□□ -0.62
SGCE-210ENST00000472326 RASGRP4Q8TDF6 673 aa11.18□□□□□ -0.62
SGCE-210ENST00000472326 TMEM40Q8WWA1 233 aa11.18□□□□□ -0.62
SGCE-210ENST00000472326 IGSF5Q9NSI5 407 aa11.18□□□□□ -0.62
SGCE-210ENST00000472326 ANGEL1Q9UNK9 670 aaKnown RBP11.18□□□□□ -0.62
SGCE-210ENST00000472326 FAM155AB1AL88 458 aaPredicted RBP11.17□□□□□ -0.62
SGCE-210ENST00000472326 WNT11O96014 354 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 ZNF865P0CJ78 1059 aaPredicted RBP11.17□□□□□ -0.62
SGCE-210ENST00000472326 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 NLRC3Q7RTR2 1065 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 VSIG10LQ86VR7 867 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 BCL7CQ8WUZ0 217 aaPredicted RBP11.17□□□□□ -0.62
SGCE-210ENST00000472326 TNKS2Q9H2K2 1166 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 CNNM2Q9H8M5 875 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 CAPN6Q9Y6Q1 641 aa11.17□□□□□ -0.62
SGCE-210ENST00000472326 TMEM265A0A087WTH1 108 aa11.16□□□□□ -0.62
SGCE-210ENST00000472326 MEIS3P2A8K0S8 358 aa11.16□□□□□ -0.62
SGCE-210ENST00000472326 UBOX5O94941 541 aa11.16□□□□□ -0.62
SGCE-210ENST00000472326 AOC3Q16853 763 aa11.16□□□□□ -0.62
SGCE-210ENST00000472326 CDCP2Q5VXM1 449 aa11.16□□□□□ -0.62
SGCE-210ENST00000472326 FAM86C2PA6NEL3 165 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 RGS13O14921 159 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 LRRN2O75325 713 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 NASPP49321 788 aaPredicted RBP11.15□□□□□ -0.62
SGCE-210ENST00000472326 LRRFIP1Q32MZ4 808 aaKnown RBP11.15□□□□□ -0.62
SGCE-210ENST00000472326 C22orf34Q6ZV56 151 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 SPRED2Q7Z698 418 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 FLCNQ8NFG4 579 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 HRASLS5Q96KN8 279 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 Q96M66 194 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 CAPN10Q9HC96 672 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 SLC5A6Q9Y289 635 aa11.15□□□□□ -0.62
SGCE-210ENST00000472326 COL17A1Q9UMD9 1497 aaPredicted RBP11.14□□□□□ -0.63
SGCE-210ENST00000472326 NME1P15531 152 aaKnown RBP11.14□□□□□ -0.63
SGCE-210ENST00000472326 SOX9P48436 509 aa11.14□□□□□ -0.63
SGCE-210ENST00000472326 TNK2Q07912 1038 aa11.14□□□□□ -0.63
SGCE-210ENST00000472326 WFDC3Q8IUB2 231 aa11.14□□□□□ -0.63
SGCE-210ENST00000472326 HSPA12BQ96MM6 686 aa11.14□□□□□ -0.63
SGCE-210ENST00000472326 KREMEN1Q96MU8 473 aa11.14□□□□□ -0.63
SGCE-210ENST00000472326 LOC100996750A0A140TA64 210 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 H3BS24 57 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 IMPDH2P12268 514 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 GP2P55259 537 aaKnown RBP11.13□□□□□ -0.63
SGCE-210ENST00000472326 PRKCQQ04759 706 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 RUFY4Q6ZNE9 571 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 SPATA32Q96LK8 384 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 SLC9A7Q96T83 725 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 KRTAP4-6Q9BYQ5 205 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 VAV3Q9UKW4 847 aa11.13□□□□□ -0.63
SGCE-210ENST00000472326 KIR3DL1P43629 444 aa11.12□□□□□ -0.63
SGCE-210ENST00000472326 CHMP4BP1P59074 171 aa11.12□□□□□ -0.63
SGCE-210ENST00000472326 COL9A2Q14055 689 aaPredicted RBP11.12□□□□□ -0.63
SGCE-210ENST00000472326 RNF141Q8WVD5 230 aa11.12□□□□□ -0.63
SGCE-210ENST00000472326 PAK6Q9NQU5 681 aaPredicted RBP11.12□□□□□ -0.63
SGCE-210ENST00000472326 SNX11Q9Y5W9 270 aa11.12□□□□□ -0.63
SGCE-210ENST00000472326 ST14Q9Y5Y6 855 aa11.12□□□□□ -0.63
SGCE-210ENST00000472326 ACRP10323 421 aa11.11□□□□□ -0.63
SGCE-210ENST00000472326 CD8BP10966 210 aa11.11□□□□□ -0.63
SGCE-210ENST00000472326 CLCN7P51798 805 aa11.11□□□□□ -0.63
SGCE-210ENST00000472326 LSRQ86X29 649 aaPredicted RBP11.11□□□□□ -0.63
SGCE-210ENST00000472326 TP53INP2Q8IXH6 220 aa11.11□□□□□ -0.63
SGCE-210ENST00000472326 STK11IPQ8N1F8 1099 aa11.11□□□□□ -0.63
SGCE-210ENST00000472326 MISP3Q96FF7 219 aa11.11□□□□□ -0.63
SGCE-210ENST00000472326 COX4I2Q96KJ9 171 aa11.11□□□□□ -0.63
SGCE-210ENST00000472326 ZNF512BQ96KM6 892 aaPredicted RBP11.11□□□□□ -0.63
SGCE-210ENST00000472326 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
SGCE-210ENST00000472326 TNFRSF10CO14798 259 aa11.1□□□□□ -0.63
SGCE-210ENST00000472326 OAS3Q9Y6K5 1087 aaKnown RBP11.1□□□□□ -0.63
SGCE-210ENST00000472326 WASH4PA8MWX3 477 aa11.09□□□□□ -0.63
SGCE-210ENST00000472326 XP32Q5T750 250 aa11.09□□□□□ -0.63
SGCE-210ENST00000472326 TMEM192Q8IY95 271 aa11.09□□□□□ -0.63
SGCE-210ENST00000472326 DTWD2Q8NBA8 298 aa11.09□□□□□ -0.63
SGCE-210ENST00000472326 CRBNQ96SW2 442 aa11.09□□□□□ -0.63
SGCE-210ENST00000472326 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms