RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 CDH24Q86UP0 819 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 ZDHHC13Q8IUH4 622 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 COX4I2Q96KJ9 171 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 KIF2CQ99661 725 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 ANTXR1Q9H6X2 564 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 PRDM5Q9NQX1 630 aaPredicted RBP7.37□□□□□ -1.23
CDHR3-208ENST00000471910 CYP26A1O43174 497 aa7.36□□□□□ -1.23
CDHR3-208ENST00000471910 SF3A1Q15459 793 aaKnown RBP7.36□□□□□ -1.23
CDHR3-208ENST00000471910 SFRP5Q5T4F7 317 aa7.36□□□□□ -1.23
CDHR3-208ENST00000471910 SHISA5Q8N114 240 aa7.36□□□□□ -1.23
CDHR3-208ENST00000471910 BAHD1Q8TBE0 780 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-208ENST00000471910 ANAPC16Q96DE5 110 aa7.36□□□□□ -1.23
CDHR3-208ENST00000471910 TANGO6Q9C0B7 1094 aa7.36□□□□□ -1.23
CDHR3-208ENST00000471910 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.36□□□□□ -1.23
CDHR3-208ENST00000471910 SLC12A7Q9Y666 1083 aa7.36□□□□□ -1.23
CDHR3-208ENST00000471910 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 IGF2BP3O00425 579 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDHR3-208ENST00000471910 TNFRSF10CO14798 259 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 EOMESO95936 686 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 ATP2B1P20020 1258 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 INTS5Q6P9B9 1019 aaKnown RBP7.35□□□□□ -1.23
CDHR3-208ENST00000471910 LSRQ86X29 649 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-208ENST00000471910 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-208ENST00000471910 RIN3Q8TB24 985 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 SHDQ96IW2 340 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 LRRC4CQ9HCJ2 640 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 MAPK8IP1Q9UQF2 711 aa7.35□□□□□ -1.23
CDHR3-208ENST00000471910 ADAM23O75077 832 aa7.34□□□□□ -1.23
CDHR3-208ENST00000471910 FGRP09769 529 aa7.34□□□□□ -1.23
CDHR3-208ENST00000471910 GUCY2CP25092 1073 aa7.34□□□□□ -1.23
CDHR3-208ENST00000471910 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.23
CDHR3-208ENST00000471910 DHRS1Q96LJ7 313 aa7.34□□□□□ -1.23
CDHR3-208ENST00000471910 MKNK2Q9HBH9 465 aa7.34□□□□□ -1.23
CDHR3-208ENST00000471910 PPP1R1BQ9UD71 204 aaPredicted RBP7.34□□□□□ -1.23
CDHR3-208ENST00000471910 RNF112Q9ULX5 631 aa7.34□□□□□ -1.23
CDHR3-208ENST00000471910 R3HCC1Q9Y3T6 440 aaKnown RBP7.34□□□□□ -1.23
CDHR3-208ENST00000471910 PRR19A6NJB7 356 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 COBLO75128 1261 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 FOSL1P15407 271 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 KIR3DL1P43629 444 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 PPP2R5EQ16537 467 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 TNNI3KQ59H18 835 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 DNAJB8Q8NHS0 232 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 PPP1R13LQ8WUF5 828 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 MRVI1Q9Y6F6 885 aa7.33□□□□□ -1.24
CDHR3-208ENST00000471910 CLEC3AO75596 197 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 STK10O94804 968 aaKnown RBP7.32□□□□□ -1.24
CDHR3-208ENST00000471910 CBX7O95931 251 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 TGFB1P01137 390 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 RNF4P78317 190 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 FAM214BQ7L5A3 538 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 C19orf47Q8N9M1 422 aaKnown RBP7.32□□□□□ -1.24
CDHR3-208ENST00000471910 RNF141Q8WVD5 230 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 HEXIM2Q96MH2 286 aaKnown RBP7.32□□□□□ -1.24
CDHR3-208ENST00000471910 SLC9A7Q96T83 725 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 KCNH3Q9ULD8 1083 aa7.32□□□□□ -1.24
CDHR3-208ENST00000471910 FAM155AB1AL88 458 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-208ENST00000471910 UBOX5O94941 541 aa7.31□□□□□ -1.24
CDHR3-208ENST00000471910 POLR2BP30876 1174 aaKnown RBP7.31□□□□□ -1.24
CDHR3-208ENST00000471910 RUFY4Q6ZNE9 571 aa7.31□□□□□ -1.24
CDHR3-208ENST00000471910 SREK1Q8WXA9 508 aaKnown RBP7.31□□□□□ -1.24
CDHR3-208ENST00000471910 KREMEN1Q96MU8 473 aa7.31□□□□□ -1.24
CDHR3-208ENST00000471910 ASPNQ9BXN1 380 aa7.31□□□□□ -1.24
CDHR3-208ENST00000471910 ETFBP38117 255 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 CASP7P55210 303 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 OXCT1P55809 520 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 BBS9Q3SYG4 887 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 UNC5AQ6ZN44 842 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 C22orf34Q6ZV56 151 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 TTC6Q86TZ1 520 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 NETO1Q8TDF5 533 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 ZNF408Q9H9D4 720 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 PRKAG3Q9UGI9 489 aa7.3□□□□□ -1.24
CDHR3-208ENST00000471910 TMEM265A0A087WTH1 108 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 A0A1W2PQH9 124 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 FAM86C2PA6NEL3 165 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 SMAD7O15105 426 aaKnown RBP7.29□□□□□ -1.24
CDHR3-208ENST00000471910 CEACAM5P06731 702 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 ZNF865P0CJ78 1059 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-208ENST00000471910 ACRP10323 421 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 ITIH2P19823 946 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 GTF2F1P35269 517 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDHR3-208ENST00000471910 IFI16Q16666 785 aaKnown RBP7.29□□□□□ -1.24
CDHR3-208ENST00000471910 MFSD4AQ8N468 514 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 FAM181AQ8N9Y4 354 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 DRC1Q96MC2 740 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 FBXL18Q96ME1 805 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 SLC6A18Q96N87 628 aa7.29□□□□□ -1.24
CDHR3-208ENST00000471910 CKAP2LQ8IYA6 745 aa7.28□□□□□ -1.24
CDHR3-208ENST00000471910 PIWIL2Q8TC59 973 aaKnown RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 SMARCC1Q92922 1105 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 HIRIP3Q9BW71 556 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 MKRN2Q9H000 416 aaKnown RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 ASCC2Q9H1I8 757 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 PHAXQ9H814 394 aaKnown RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 ACTR10Q9NZ32 417 aa7.28□□□□□ -1.24
CDHR3-208ENST00000471910 SUCOQ9UBS9 1254 aaKnown RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 ZC3H7BQ9UGR2 993 aaKnown RBP7.28□□□□□ -1.24
CDHR3-208ENST00000471910 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms