RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 TMEM265A0A087WTH1 108 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 FOXD2O60548 495 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 ESRRAP11474 423 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 AFMP43652 599 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 KRTAP1-1Q07627 177 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 EHHADHQ08426 723 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 OS9Q13438 667 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 ARSHQ5FYA8 562 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 HP1BP3Q5SSJ5 553 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 ODR4Q5SWX8 454 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 FAM43BQ6ZT52 329 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 PCGF5Q86SE9 256 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 FERMT3Q86UX7 667 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 CKAP2LQ8IYA6 745 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 FAM181AQ8N9Y4 354 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 C12orf49Q9H741 205 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 TMEM63CQ9P1W3 806 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 SIRPGQ9P1W8 387 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 CNTN3Q9P232 1028 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 WWC3Q9ULE0 1092 aa4.27□□□□□ -1.73
SCN3A-207ENST00000471697 THRAP3Q9Y2W1 955 aaKnown RBP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-207ENST00000471697 A6NHS1 94 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 FAM13AO94988 1023 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 IGHA2P01877 340 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 MPSTP25325 297 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 ASPAP45381 313 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 MYBPC2Q14324 1141 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 DHX8Q14562 1220 aaKnown RBP4.26□□□□□ -1.73
SCN3A-207ENST00000471697 VPS72Q15906 364 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 ZNF394Q53GI3 561 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 XKR5Q6UX68 686 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 DYMQ7RTS9 669 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 PRPF38AQ8NAV1 312 aaKnown RBP4.26□□□□□ -1.73
SCN3A-207ENST00000471697 HELQQ8TDG4 1101 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 SLKQ9H2G2 1235 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-207ENST00000471697 TNKS2Q9H2K2 1166 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 PARD6AQ9NPB6 346 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 SNX11Q9Y5W9 270 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 EID1Q9Y6B2 187 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 U3KQE9 123 aa4.26□□□□□ -1.73
SCN3A-207ENST00000471697 SYNGAP1Q96PV0 1343 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 CLSPNQ9HAW4 1339 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 CCER2I3L3R5 266 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 IFRD1O00458 451 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-207ENST00000471697 NDUFB5O43674 189 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 PSPNO60542 156 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 TRPA1O75762 1119 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 LDHAP00338 332 aaKnown RBP4.25□□□□□ -1.73
SCN3A-207ENST00000471697 FGAP02671 866 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 CEACAM5P06731 702 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 GNALP38405 381 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 MAPK8P45983 427 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 OXCT1P55809 520 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 GSTM4Q03013 218 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 FYB2Q5VWT5 728 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 LRP10Q7Z4F1 713 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 KIAA0907Q7Z7F0 614 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-207ENST00000471697 USP48Q86UV5 1035 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 SAMD3Q8N6K7 520 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 NUDT16Q96DE0 195 aaKnown RBP4.25□□□□□ -1.73
SCN3A-207ENST00000471697 ZNF512BQ96KM6 892 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-207ENST00000471697 DMRTB1Q96MA1 342 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 BHLHE41Q9C0J9 482 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-207ENST00000471697 GGNBP2Q9H3C7 697 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 ZFYVE1Q9HBF4 777 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 SFMBT1Q9UHJ3 866 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 PLAGL2Q9UPG8 496 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 KAT6BQ8WYB5 2073 aa4.25□□□□□ -1.73
SCN3A-207ENST00000471697 CFAP69A5D8W1 941 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 CAND2O75155 1236 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 CTSHP09668 335 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 TMEM253P0C7T8 217 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 FAM87AP0C7U9 286 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 SYN1P17600 705 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 CES1P23141 567 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 GLDCP23378 1020 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 EIF1AXP47813 144 aaKnown RBP4.24□□□□□ -1.73
SCN3A-207ENST00000471697 MASP1P48740 699 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 EXOSC10Q01780 885 aaKnown RBP4.24□□□□□ -1.73
SCN3A-207ENST00000471697 ATP2B2Q01814 1243 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 SAFB2Q14151 953 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-207ENST00000471697 ZRSR2Q15696 482 aaKnown RBP4.24□□□□□ -1.73
SCN3A-207ENST00000471697 MPZL3Q6UWV2 235 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 ABTB2Q8N961 1025 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 EDEM1Q92611 657 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 PMEPA1Q969W9 287 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 ALKBH8Q96BT7 664 aaKnown RBP4.24□□□□□ -1.73
SCN3A-207ENST00000471697 SRPK1Q96SB4 655 aaKnown RBP4.24□□□□□ -1.73
SCN3A-207ENST00000471697 CEP89Q96ST8 783 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 CASS4Q9NQ75 786 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 HOMER2Q9NSB8 354 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 NRBP1Q9UHY1 535 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 DAGLAQ9Y4D2 1042 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 PCDHGB7Q9Y5F8 929 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 AK5Q9Y6K8 562 aa4.24□□□□□ -1.73
SCN3A-207ENST00000471697 A0A0G2JLL6 359 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 ZNF500O60304 480 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-207ENST00000471697 CDC45O75419 566 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms