RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PPP1R12BO60237 982 aaPredicted RBP22.55■■□□□ 1.2
PSPC1-203ENST00000471658 CTNND1O60716 968 aaKnown RBP22.55■■□□□ 1.2
PSPC1-203ENST00000471658 TTLL12Q14166 644 aaPredicted RBP22.55■■□□□ 1.2
PSPC1-203ENST00000471658 RAB11FIP4Q86YS3 637 aa22.55■■□□□ 1.2
PSPC1-203ENST00000471658 SIAH1Q8IUQ4 282 aa22.55■■□□□ 1.2
PSPC1-203ENST00000471658 FBXL16Q8N461 479 aa22.55■■□□□ 1.2
PSPC1-203ENST00000471658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.55■■□□□ 1.2
PSPC1-203ENST00000471658 MTA3Q9BTC8 594 aa22.55■■□□□ 1.2
PSPC1-203ENST00000471658 LARGE1O95461 756 aa22.54■■□□□ 1.2
PSPC1-203ENST00000471658 IFIT1BQ5T764 474 aaKnown RBP22.54■■□□□ 1.2
PSPC1-203ENST00000471658 SNX21Q969T3 373 aa22.54■■□□□ 1.2
PSPC1-203ENST00000471658 TBC1D2Q9BYX2 928 aa22.54■■□□□ 1.2
PSPC1-203ENST00000471658 CLIP2Q9UDT6 1046 aa22.54■■□□□ 1.2
PSPC1-203ENST00000471658 STX8Q9UNK0 236 aa22.54■■□□□ 1.2
PSPC1-203ENST00000471658 LIFRP42702 1097 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 NOVP48745 357 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 ATP2B2Q01814 1243 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 NFXL1Q6ZNB6 911 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.53■■□□□ 1.2
PSPC1-203ENST00000471658 DGKHQ86XP1 1220 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 TMEM47Q9BQJ4 181 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 GREB1LQ9C091 1923 aaPredicted RBP22.53■■□□□ 1.2
PSPC1-203ENST00000471658 KLF18A0A0U1RQI7 1052 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 UBE2Q2LH0YL09 131 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 EEF2P13639 858 aaKnown RBP22.53■■□□□ 1.2
PSPC1-203ENST00000471658 MAP3K9P80192 1104 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 ANKRD1Q15327 319 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 ANKS1AQ92625 1134 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 CHMP4CQ96CF2 233 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 MYL10Q9BUA6 226 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 NAP1L2Q9ULW6 460 aaPredicted RBP22.53■■□□□ 1.2
PSPC1-203ENST00000471658 LIMCH1Q9UPQ0 1083 aa22.53■■□□□ 1.2
PSPC1-203ENST00000471658 CELF2O95319 508 aaKnown RBP22.52■■□□□ 1.2
PSPC1-203ENST00000471658 ANP32AP39687 249 aaKnown RBP22.52■■□□□ 1.2
PSPC1-203ENST00000471658 CCDC178Q5BJE1 867 aa22.52■■□□□ 1.2
PSPC1-203ENST00000471658 SGMS1Q86VZ5 419 aa22.52■■□□□ 1.2
PSPC1-203ENST00000471658 SCYL3Q8IZE3 742 aa22.52■■□□□ 1.2
PSPC1-203ENST00000471658 KANSL2Q9H9L4 492 aa22.52■■□□□ 1.2
PSPC1-203ENST00000471658 CCDC69A6NI79 296 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 ASNSP08243 561 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 RXRAP19793 462 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 IREB2P48200 963 aaKnown RBP22.51■■□□□ 1.19
PSPC1-203ENST00000471658 ICA1Q05084 483 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 STK3Q13188 491 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 ME3Q16798 604 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 CST9Q5W186 159 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 ACER1Q8TDN7 264 aa22.51■■□□□ 1.19
PSPC1-203ENST00000471658 A0A1W2PRG0 241 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 TTLL1O95922 423 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 VGLL4Q14135 290 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 ARMC9Q7Z3E5 817 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 LRRC47Q8N1G4 583 aaKnown RBP22.5■■□□□ 1.19
PSPC1-203ENST00000471658 TMTC2Q8N394 836 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 CLMNQ96JQ2 1002 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 NYAP2Q9P242 653 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 MTMR7Q9Y216 660 aa22.5■■□□□ 1.19
PSPC1-203ENST00000471658 PDIA3P30101 505 aaKnown RBP22.49■■□□□ 1.19
PSPC1-203ENST00000471658 ECE1P42892 770 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 EVCP57679 992 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 MAP3K11Q16584 847 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 NOL9Q5SY16 702 aaKnown RBP22.49■■□□□ 1.19
PSPC1-203ENST00000471658 APOA5Q6Q788 366 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 HSCBQ8IWL3 235 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 NECAB1Q8N987 351 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 TMX3Q96JJ7 454 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 KAT14Q9H8E8 782 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 SNCAIPQ9Y6H5 919 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 TOP1P11387 765 aaKnown RBP22.49■■□□□ 1.19
PSPC1-203ENST00000471658 PTPRAP18433 802 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 SLC4A3P48751 1232 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 MCM2P49736 904 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 RASGRP2Q7LDG7 609 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 ZNF654Q8IZM8 581 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 IL27Q8NEV9 243 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 PICK1Q9NRD5 415 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 HPS5Q9UPZ3 1129 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 SLC12A7Q9Y666 1083 aa22.49■■□□□ 1.19
PSPC1-203ENST00000471658 ATAD5Q96QE3 1844 aa22.48■■□□□ 1.19
PSPC1-203ENST00000471658 K7ELQ4 463 aaPredicted RBP22.48■■□□□ 1.19
PSPC1-203ENST00000471658 DTNBO60941 627 aa22.48■■□□□ 1.19
PSPC1-203ENST00000471658 CCDC144CPQ8IYA2 1237 aa22.48■■□□□ 1.19
PSPC1-203ENST00000471658 PNMA1Q8ND90 353 aa22.48■■□□□ 1.19
PSPC1-203ENST00000471658 SMC1BQ8NDV3 1235 aa22.48■■□□□ 1.19
PSPC1-203ENST00000471658 CNKSR2Q8WXI2 1034 aa22.48■■□□□ 1.19
PSPC1-203ENST00000471658 GBA2Q9HCG7 927 aaPredicted RBP22.48■■□□□ 1.19
PSPC1-203ENST00000471658 GOLGA8BA8MQT2 603 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 USP17L5A8MUK1 530 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 TOMM70O94826 608 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 CCT2P78371 535 aaKnown RBP22.47■■□□□ 1.19
PSPC1-203ENST00000471658 ST3GAL1Q11201 340 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 LDLRAD1Q5T700 205 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 MICU3Q86XE3 530 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 NUP133Q8WUM0 1156 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 MKL1Q969V6 931 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 ZNF274Q96GC6 653 aaPredicted RBP22.47■■□□□ 1.19
PSPC1-203ENST00000471658 ELP3Q9H9T3 547 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 GINM1Q9NU53 330 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 CSADQ9Y600 493 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 PASKQ96RG2 1323 aa22.47■■□□□ 1.19
PSPC1-203ENST00000471658 TROAPQ12815 778 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms