RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 FAM196BA6NMK8 535 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 KDM4AO75164 1064 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 USP5P45974 858 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 IREB2P48200 963 aaKnown RBP20.42■□□□□ 0.86
HSPG2-208ENST00000471322 TMEM67Q5HYA8 995 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 NSUN7Q8NE18 718 aaKnown RBP20.42■□□□□ 0.86
HSPG2-208ENST00000471322 ESR2Q92731 530 aa20.42■□□□□ 0.86
HSPG2-208ENST00000471322 DCP1AQ9NPI6 582 aaPredicted RBP20.42■□□□□ 0.86
HSPG2-208ENST00000471322 ARPP21Q9UBL0 812 aaPredicted RBP20.42■□□□□ 0.86
HSPG2-208ENST00000471322 ERICH2A1L162 156 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 VPS37CA5D8V6 355 aaPredicted RBP20.41■□□□□ 0.86
HSPG2-208ENST00000471322 GOLGA8BA8MQT2 603 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 FGRP09769 529 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 CCT2P78371 535 aaKnown RBP20.41■□□□□ 0.86
HSPG2-208ENST00000471322 LDLRAD1Q5T700 205 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 CTR9Q6PD62 1173 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 HHIPL1Q96JK4 782 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 WRNIP1Q96S55 665 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 GPHNQ9NQX3 736 aaPredicted RBP20.41■□□□□ 0.86
HSPG2-208ENST00000471322 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
HSPG2-208ENST00000471322 IFIT3O14879 490 aaKnown RBP20.4■□□□□ 0.86
HSPG2-208ENST00000471322 JAK2O60674 1132 aa20.4■□□□□ 0.86
HSPG2-208ENST00000471322 ECE1P42892 770 aa20.4■□□□□ 0.86
HSPG2-208ENST00000471322 ZKSCAN4Q969J2 545 aaPredicted RBP20.4■□□□□ 0.86
HSPG2-208ENST00000471322 LMBRD1Q9NUN5 540 aa20.4■□□□□ 0.86
HSPG2-208ENST00000471322 PTPDC1A2A3K4 754 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 FAM155AB1AL88 458 aaPredicted RBP20.39■□□□□ 0.86
HSPG2-208ENST00000471322 USP17L12C9JPN9 530 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 USP17L21D6R901 530 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 MAP3K11Q16584 847 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 CSPP1Q1MSJ5 1256 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 KLHL40Q2TBA0 621 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 RRP12Q5JTH9 1297 aaKnown RBP20.39■□□□□ 0.86
HSPG2-208ENST00000471322 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.86
HSPG2-208ENST00000471322 SYNE3Q6ZMZ3 975 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 NFXL1Q6ZNB6 911 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 RASAL3Q86YV0 1011 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 AMOTL1Q8IY63 956 aa20.39■□□□□ 0.86
HSPG2-208ENST00000471322 CPLX1O14810 134 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 PRPF40AO75400 957 aaKnown RBP20.38■□□□□ 0.85
HSPG2-208ENST00000471322 CDKL5O76039 1030 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 CTDNEP1O95476 244 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 INPP5BP32019 993 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 DCAF15Q66K64 600 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.38■□□□□ 0.85
HSPG2-208ENST00000471322 CNKSR2Q8WXI2 1034 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 SLC10A4Q96EP9 437 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 ELP3Q9H9T3 547 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 LY9Q9HBG7 655 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 INCENPQ9NQS7 918 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 HPS5Q9UPZ3 1129 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 DDX49Q9Y6V7 483 aaKnown RBP20.38■□□□□ 0.85
HSPG2-208ENST00000471322 CDK5RAP2Q96SN8 1893 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 ATRNL1Q5VV63 1379 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 H3BQV1 296 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 NPM3O75607 178 aaKnown RBP20.38■□□□□ 0.85
HSPG2-208ENST00000471322 RCAN1P53805 252 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 VGLL4Q14135 290 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 ANKRD13AQ8IZ07 590 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 RGS22Q8NE09 1264 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.38■□□□□ 0.85
HSPG2-208ENST00000471322 HOOK2Q96ED9 719 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 UBAC1Q9BSL1 405 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 NCOA5Q9HCD5 579 aaKnown RBP20.38■□□□□ 0.85
HSPG2-208ENST00000471322 TACC3Q9Y6A5 838 aa20.38■□□□□ 0.85
HSPG2-208ENST00000471322 ZBTB43O43298 467 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 ORC4O43929 436 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 SLC10A3P09131 477 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 MAP3K9P80192 1104 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 PDE4BQ07343 736 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 APOA5Q6Q788 366 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 CCDC102AQ96A19 550 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 DDX11Q96FC9 970 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 ZNF341Q9BYN7 854 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 SLC12A7Q9Y666 1083 aa20.37■□□□□ 0.85
HSPG2-208ENST00000471322 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
HSPG2-208ENST00000471322 METAP2P50579 478 aaKnown RBP eCLIP20.36■□□□□ 0.854e-7■■■□□ 15
HSPG2-208ENST00000471322 EVX2Q03828 476 aa20.36■□□□□ 0.85
HSPG2-208ENST00000471322 WTAPQ15007 396 aa20.36■□□□□ 0.85
HSPG2-208ENST00000471322 TMEM87AQ8NBN3 555 aa20.36■□□□□ 0.85
HSPG2-208ENST00000471322 ZSCAN16Q9H4T2 348 aaPredicted RBP20.36■□□□□ 0.85
HSPG2-208ENST00000471322 OTOFQ9HC10 1997 aa20.36■□□□□ 0.85
HSPG2-208ENST00000471322 MBD3O95983 291 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 JMYQ8N9B5 988 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.35■□□□□ 0.85
HSPG2-208ENST00000471322 MCM9Q9NXL9 1143 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 CSADQ9Y600 493 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 KIF23Q02241 960 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-208ENST00000471322 NOGQ13253 232 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 PPP2R5BQ15173 497 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 IQCA1Q86XH1 822 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 NKX2-3Q8TAU0 364 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 PI4KBQ9UBF8 816 aa20.35■□□□□ 0.85
HSPG2-208ENST00000471322 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.35■□□□□ 0.85
HSPG2-208ENST00000471322 PHF20L1A8MW92 1017 aa20.34■□□□□ 0.85
HSPG2-208ENST00000471322 C12orf60Q5U649 245 aa20.34■□□□□ 0.85
HSPG2-208ENST00000471322 DHX36Q9H2U1 1008 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms