RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 CLCN7P51798 805 aa8.77□□□□□ -1.01
PRPF40A-206ENST00000471167 HS2ST1Q7LGA3 356 aa8.77□□□□□ -1.01
PRPF40A-206ENST00000471167 FAM13CQ8NE31 585 aa8.77□□□□□ -1.01
PRPF40A-206ENST00000471167 EAF1Q96JC9 268 aaPredicted RBP8.77□□□□□ -1.01
PRPF40A-206ENST00000471167 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
PRPF40A-206ENST00000471167 LRRN2O75325 713 aa8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 BAHD1Q8TBE0 780 aaPredicted RBP8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 CYB5D2Q8WUJ1 264 aa8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 ASB11Q8WXH4 323 aa8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 VWCEQ96DN2 955 aa8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 SUPT16HQ9Y5B9 1047 aaKnown RBP8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
PRPF40A-206ENST00000471167 UNCXA6NJT0 531 aa8.75□□□□□ -1.01
PRPF40A-206ENST00000471167 SLC22A31A6NKX4 558 aa8.75□□□□□ -1.01
PRPF40A-206ENST00000471167 H3BS24 57 aa8.75□□□□□ -1.01
PRPF40A-206ENST00000471167 ATE1O95260 518 aa8.75□□□□□ -1.01
PRPF40A-206ENST00000471167 CLCQ05315 142 aa8.75□□□□□ -1.01
PRPF40A-206ENST00000471167 RGS22Q8NE09 1264 aa8.75□□□□□ -1.01
PRPF40A-206ENST00000471167 DUSP15Q9H1R2 295 aaPredicted RBP8.75□□□□□ -1.01
PRPF40A-206ENST00000471167 ROBO2Q9HCK4 1378 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 RACK1P63244 317 aaKnown RBP8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 ZNF394Q53GI3 561 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 KRTAP19-1Q8IUB9 90 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 ANTXR1Q9H6X2 564 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 EHMT1Q9H9B1 1298 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 C19orf73Q9NVV2 129 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 KIAA1522Q9P206 1035 aaPredicted RBP8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 KLHL3Q9UH77 587 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 PCDHB14Q9Y5E9 798 aa8.74□□□□□ -1.01
PRPF40A-206ENST00000471167 SRFP11831 508 aa8.73□□□□□ -1.01
PRPF40A-206ENST00000471167 ITGAEP38570 1179 aa8.73□□□□□ -1.01
PRPF40A-206ENST00000471167 ANGEL2Q5VTE6 544 aaKnown RBP8.73□□□□□ -1.01
PRPF40A-206ENST00000471167 METTL16Q86W50 562 aaKnown RBP8.73□□□□□ -1.01
PRPF40A-206ENST00000471167 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
PRPF40A-206ENST00000471167 PCDHGB7Q9Y5F8 929 aa8.73□□□□□ -1.01
PRPF40A-206ENST00000471167 FAM155AB1AL88 458 aaPredicted RBP8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 UBOX5O94941 541 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 ESR1P03372 595 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 VAMP1P23763 118 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 ZNF76P36508 570 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 ZP2Q05996 745 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 IKZF1Q13422 519 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 SLC23A3Q6PIS1 610 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 SLITRK4Q8IW52 837 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 UBE2FQ969M7 185 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 KIF2CQ99661 725 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 NT5C1AQ9BXI3 368 aa8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 RC3H2Q9HBD1 1191 aaKnown RBP8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.72□□□□□ -1.01
PRPF40A-206ENST00000471167 KIR3DL1P43629 444 aa8.71□□□□□ -1.02
PRPF40A-206ENST00000471167 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
PRPF40A-206ENST00000471167 CWF19L2Q2TBE0 894 aaKnown RBP8.71□□□□□ -1.02
PRPF40A-206ENST00000471167 ZNF746Q6NUN9 644 aaPredicted RBP8.71□□□□□ -1.02
PRPF40A-206ENST00000471167 DTWD2Q8NBA8 298 aa8.71□□□□□ -1.02
PRPF40A-206ENST00000471167 CARS2Q9HA77 564 aaKnown RBP8.71□□□□□ -1.02
PRPF40A-206ENST00000471167 ZSWIM5Q9P217 1185 aa8.71□□□□□ -1.02
PRPF40A-206ENST00000471167 ETV3P41162 512 aa8.7□□□□□ -1.02
PRPF40A-206ENST00000471167 GAB4Q2WGN9 574 aa8.7□□□□□ -1.02
PRPF40A-206ENST00000471167 KREMEN1Q96MU8 473 aa8.7□□□□□ -1.02
PRPF40A-206ENST00000471167 LMCD1Q9NZU5 365 aa8.7□□□□□ -1.02
PRPF40A-206ENST00000471167 CYP7A1P22680 504 aa8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 POLR2BP30876 1174 aaKnown RBP8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 ARSHQ5FYA8 562 aa8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 THAP5Q7Z6K1 395 aa8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 PIWIL2Q8TC59 973 aaKnown RBP8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 ATG4CQ96DT6 458 aa8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 COX4I2Q96KJ9 171 aa8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 CCDC74BQ96LY2 380 aa8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 METTL5Q9NRN9 209 aaKnown RBP8.69□□□□□ -1.02
PRPF40A-206ENST00000471167 RGS13O14921 159 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 APOBRQ0VD83 1088 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 FYB2Q5VWT5 728 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 CDCP2Q5VXM1 449 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 OVOS1Q6IE37 1185 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 GK5Q6ZS86 529 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 ATG4DQ86TL0 474 aaPredicted RBP8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 USP48Q86UV5 1035 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 REXO1Q8N1G1 1221 aaKnown RBP8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 RNF141Q8WVD5 230 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 SPON2Q9BUD6 331 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 CNNM2Q9H8M5 875 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 DDX41Q9UJV9 622 aaKnown RBP8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 CTNND2Q9UQB3 1225 aa8.68□□□□□ -1.02
PRPF40A-206ENST00000471167 SHISA3A0PJX4 238 aa8.67□□□□□ -1.02
PRPF40A-206ENST00000471167 JUNBP17275 347 aaPredicted RBP8.67□□□□□ -1.02
PRPF40A-206ENST00000471167 KIAA0825Q8IV33 1275 aa8.67□□□□□ -1.02
PRPF40A-206ENST00000471167 GPR62Q9BZJ7 368 aa8.67□□□□□ -1.02
PRPF40A-206ENST00000471167 GMIPQ9P107 970 aa8.67□□□□□ -1.02
PRPF40A-206ENST00000471167 RNF114Q9Y508 228 aa8.67□□□□□ -1.02
PRPF40A-206ENST00000471167 PAX4O43316 350 aa8.66□□□□□ -1.02
PRPF40A-206ENST00000471167 FLAD1Q8NFF5 587 aa8.66□□□□□ -1.02
PRPF40A-206ENST00000471167 HDLBPQ00341 1268 aaKnown RBP8.65□□□□□ -1.02
PRPF40A-206ENST00000471167 PHACTR4Q8IZ21 702 aa8.65□□□□□ -1.02
PRPF40A-206ENST00000471167 NKD1Q969G9 470 aa8.65□□□□□ -1.02
PRPF40A-206ENST00000471167 RNF34Q969K3 372 aa8.65□□□□□ -1.02
PRPF40A-206ENST00000471167 MRRFQ96E11 262 aaKnown RBP8.65□□□□□ -1.02
PRPF40A-206ENST00000471167 DNAJC25-GNG10A0A024R161 153 aa8.64□□□□□ -1.03
PRPF40A-206ENST00000471167 MEIS3P2A8K0S8 358 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms