RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 TEPSINQ96N21 525 aa10.4□□□□□ -0.74
LMCD1-207ENST00000470776 NCOA5Q9HCD5 579 aaKnown RBP10.4□□□□□ -0.74
LMCD1-207ENST00000470776 MTMR4Q9NYA4 1195 aa10.4□□□□□ -0.74
LMCD1-207ENST00000470776 SBF1O95248 1867 aa10.4□□□□□ -0.75
LMCD1-207ENST00000470776 ECM29Q5VYK3 1845 aa10.4□□□□□ -0.75
LMCD1-207ENST00000470776 CCDC196A0A1B0GTZ2 297 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 PTPDC1A2A3K4 754 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 GOLGA8AA7E2F4 631 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 JAK2O60674 1132 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 DDNO94850 711 aaPredicted RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 TOP1P11387 765 aaKnown RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 IFNAR1P17181 557 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 PDCP20941 246 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 SYT1P21579 422 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 EPS15P42566 896 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 HIRAP54198 1017 aaPredicted RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 RASA3Q14644 834 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 RTN1Q16799 776 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 TBC1D10BQ4KMP7 808 aaPredicted RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 RBM26Q5T8P6 1007 aaKnown RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 CPLX2Q6PUV4 134 aaKnown RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 ZSCAN29Q8IWY8 852 aaPredicted RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 CRACR2BQ8N4Y2 399 aaPredicted RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 MKL1Q969V6 931 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 CSRNP1Q96S65 589 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 VEZTQ9HBM0 779 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 RBM28Q9NW13 759 aaKnown RBP10.39□□□□□ -0.75
LMCD1-207ENST00000470776 HACL1Q9UJ83 578 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 KIF3AQ9Y496 699 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 MYH1P12882 1939 aa10.39□□□□□ -0.75
LMCD1-207ENST00000470776 PITPNM2Q9BZ72 1349 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 STK36Q9NRP7 1315 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 GLTPD2A6NH11 291 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 GOLGA6L22H0YM25 854 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 STX6O43752 255 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 CDKL5O76039 1030 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 FUT2Q10981 343 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 CERKLQ49MI3 558 aaPredicted RBP10.38□□□□□ -0.75
LMCD1-207ENST00000470776 DPY19L2Q6NUT2 758 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 TMEM179Q6ZVK1 233 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 MICU3Q86XE3 530 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 APOBEC3FQ8IUX4 373 aaKnown RBP10.38□□□□□ -0.75
LMCD1-207ENST00000470776 TRPM4Q8TD43 1214 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 CEP95Q96GE4 821 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 MYL10Q9BUA6 226 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 TMEM39BQ9GZU3 492 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 ADARB2Q9NS39 739 aaKnown RBP10.38□□□□□ -0.75
LMCD1-207ENST00000470776 NYAP2Q9P242 653 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 NAP1L2Q9ULW6 460 aaPredicted RBP10.38□□□□□ -0.75
LMCD1-207ENST00000470776 SYNPO2Q9UMS6 1093 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 PPP2R3BQ9Y5P8 575 aa10.38□□□□□ -0.75
LMCD1-207ENST00000470776 SIPA1L1O43166 1804 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 ASTN2O75129 1339 aaPredicted RBP10.37□□□□□ -0.75
LMCD1-207ENST00000470776 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
LMCD1-207ENST00000470776 CPLX1O14810 134 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 FMNL1O95466 1100 aaPredicted RBP10.37□□□□□ -0.75
LMCD1-207ENST00000470776 SLURP2P0DP57 97 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 SNHG28P0DPA3 235 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 SMARCA1P28370 1054 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 GUCY1A2P33402 732 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 GNAQP50148 359 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 PKP1Q13835 747 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 RRP1BQ14684 758 aaKnown RBP10.37□□□□□ -0.75
LMCD1-207ENST00000470776 GRM4Q14833 912 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 LARP1BQ659C4 914 aaKnown RBP10.37□□□□□ -0.75
LMCD1-207ENST00000470776 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 SIAH1Q8IUQ4 282 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 PNMA1Q8ND90 353 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 TNPO1Q92973 898 aaKnown RBP10.37□□□□□ -0.75
LMCD1-207ENST00000470776 KAT14Q9H8E8 782 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 KANSL2Q9H9L4 492 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 GINM1Q9NU53 330 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 MTMR6Q9Y217 621 aa10.37□□□□□ -0.75
LMCD1-207ENST00000470776 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
LMCD1-207ENST00000470776 FAM196BA6NMK8 535 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 PHF20L1A8MW92 1017 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 TTLL1O95922 423 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 ZSCAN22P10073 491 aaPredicted RBP10.36□□□□□ -0.75
LMCD1-207ENST00000470776 RXRAP19793 462 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 LMOD1P29536 600 aaPredicted RBP10.36□□□□□ -0.75
LMCD1-207ENST00000470776 KIF5BP33176 963 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 C1QTNF8P60827 252 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 JAG1P78504 1218 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 ABCB5Q2M3G0 1257 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 TMTC3Q6ZXV5 915 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 USP50Q70EL3 339 aaPredicted RBP10.36□□□□□ -0.75
LMCD1-207ENST00000470776 RAB11FIP4Q86YS3 637 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 CDAN1Q8IWY9 1227 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 NUP133Q8WUM0 1156 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 RNF26Q9BY78 433 aaPredicted RBP10.36□□□□□ -0.75
LMCD1-207ENST00000470776 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 DEFB129Q9H1M3 183 aa10.36□□□□□ -0.75
LMCD1-207ENST00000470776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.36□□□□□ -0.75
LMCD1-207ENST00000470776 ORC3Q9UBD5 711 aaPredicted RBP10.36□□□□□ -0.75
LMCD1-207ENST00000470776 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
LMCD1-207ENST00000470776 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
LMCD1-207ENST00000470776 PRPF3O43395 683 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms