RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	METAP2	P50579	478 aa	Known RBP eCLIP	10.18	□□□□□ -0.78	1e-10	■□□□□ 11.3
HDLBP-233	ENST00000470710	TROAP	Q12815	778 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	CERKL	Q49MI3	558 aa	Predicted RBP	10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	TMEM179	Q6ZVK1	233 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	MICU3	Q86XE3	530 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	SMARCC2	Q8TAQ2	1214 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	ZC3H15	Q8WU90	426 aa	Known RBP	10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	HOOK2	Q96ED9	719 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	CEP95	Q96GE4	821 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	MAP3K14	Q99558	947 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	FOXD4L1	Q9NU39	408 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	MTMR4	Q9NYA4	1195 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	CHMP5	Q9NZZ3	219 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	SMC3	Q9UQE7	1217 aa		10.18	□□□□□ -0.78
HDLBP-233	ENST00000470710	SIPA1L1	O43166	1804 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	CCDC196	A0A1B0GTZ2	297 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	FAM196B	A6NMK8	535 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	CDKL5	O76039	1030 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	CTDNEP1	O95476	244 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	TTLL1	O95922	423 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	SLURP2	P0DP57	97 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	TOP1	P11387	765 aa	Known RBP	10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	EPHX2	P34913	555 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	CCT2	P78371	535 aa	Known RBP	10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	HMGN5	P82970	282 aa	Known RBP	10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	RTN1	Q16799	776 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	ABCB5	Q2M3G0	1257 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	CDAN1	Q8IWY9	1227 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	FANCB	Q8NB91	859 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	NSUN7	Q8NE18	718 aa	Known RBP	10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	TMEM47	Q9BQJ4	181 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	KAT14	Q9H8E8	782 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	KANSL2	Q9H9L4	492 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	NCOA5	Q9HCD5	579 aa	Known RBP	10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	GINM1	Q9NU53	330 aa		10.17	□□□□□ -0.78
HDLBP-233	ENST00000470710	CPLX1	O14810	134 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	PDIA4	P13667	645 aa	Known RBP	10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	GJB2	P29033	226 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	CDC27	P30260	824 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	GUCY1A2	P33402	732 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	RRP1B	Q14684	758 aa	Known RBP	10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	DCAF15	Q66K64	600 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	CPLX2	Q6PUV4	134 aa	Known RBP	10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	PNMA8A	Q86V59	439 aa	Predicted RBP	10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	PNMA1	Q8ND90	353 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	DCPS	Q96C86	337 aa	Known RBP	10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	MYL10	Q9BUA6	226 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	CABP5	Q9NP86	173 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	RBM28	Q9NW13	759 aa	Known RBP	10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	NYAP2	Q9P242	653 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	SYNPO2	Q9UMS6	1093 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	STX8	Q9UNK0	236 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	KIF3A	Q9Y496	699 aa		10.16	□□□□□ -0.78
HDLBP-233	ENST00000470710	PTPDC1	A2A3K4	754 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	PHF20L1	A8MW92	1017 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	POTEC	B2RU33	542 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	MPHOSPH10	O00566	681 aa	Known RBP	10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	JAK2	O60674	1132 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	GH2	P01242	217 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	IFNAR1	P17181	557 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	RXRA	P19793	462 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	PDC	P20941	246 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	KIF5B	P33176	963 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	ADD1	P35611	737 aa	Known RBP	10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	CAP2	P40123	477 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	NUCB2	P80303	420 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	GRM4	Q14833	912 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	NTRK3	Q16288	839 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	SUPT20HL1	Q3ZLR7	823 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	MIGA2	Q7L4E1	593 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	RAB11FIP4	Q86YS3	637 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	SULF1	Q8IWU6	871 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	CTCFL	Q8NI51	663 aa	Predicted RBP	10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	NUP133	Q8WUM0	1156 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	MKL1	Q969V6	931 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	ZNF341	Q9BYN7	854 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	ZNF112	Q9UJU3	913 aa		10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	SCAF8	Q9UPN6	1271 aa	Known RBP	10.15	□□□□□ -0.78
HDLBP-233	ENST00000470710	STK36	Q9NRP7	1315 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	WDR90	Q96KV7	1748 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	CTNND1	O60716	968 aa	Known RBP	10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	GDF11	O95390	407 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	ASNS	P08243	561 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	GNAQ	P50148	359 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	JAG1	P78504	1218 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	ICA1	Q05084	483 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	SEPT2	Q15019	361 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	TMTC3	Q6ZXV5	915 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	KRT26	Q7Z3Y9	468 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	CCDC144CP	Q8IYA2	1237 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	RGS22	Q8NE09	1264 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	LZTS2	Q9BRK4	669 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	CLIP2	Q9UDT6	1046 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	ZBTB21	Q9ULJ3	1066 aa		10.14	□□□□□ -0.79
HDLBP-233	ENST00000470710	GREB1L	Q9C091	1923 aa	Predicted RBP	10.13	□□□□□ -0.79
HDLBP-233	ENST00000470710	PALM3	A6NDB9	673 aa	Predicted RBP	10.13	□□□□□ -0.79
HDLBP-233	ENST00000470710	FMNL1	O95466	1100 aa	Predicted RBP	10.13	□□□□□ -0.79

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