RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 RNF19AQ9NV58 838 aa9.36□□□□□ -0.91
PTP4A1-202ENST00000470661 SRCAPQ6ZRS2 3230 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 SPATA31A5Q5VU36 1347 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 SPATA31A7Q8IWB4 1347 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 LOC100289279A0A1B0GTE1 492 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 USP6P35125 1406 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 PTPN12Q05209 780 aaKnown RBP9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 RSPO4Q2I0M5 234 aaPredicted RBP9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 EAPPQ56P03 285 aaPredicted RBP9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 Q6ZS46 218 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 TRIM56Q9BRZ2 755 aaKnown RBP9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 RUSC1Q9BVN2 902 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 NRSN2Q9GZP1 204 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 PPP4R2Q9NY27 417 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 AKAP2Q9Y2D5 859 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 PLCH1Q4KWH8 1693 aa9.35□□□□□ -0.91
PTP4A1-202ENST00000470661 CDK12Q9NYV4 1490 aaPredicted RBP9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 BRWD3Q6RI45 1802 aa9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 DZIP1LQ8IYY4 767 aaKnown RBP9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 UBL7Q96S82 380 aaPredicted RBP9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 POLR3GLQ9BT43 218 aa9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 KTN1Q86UP2 1357 aaKnown RBP9.34□□□□□ -0.91
PTP4A1-202ENST00000470661 USP19O94966 1318 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 CAMTA1Q9Y6Y1 1673 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 SSH2Q76I76 1423 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 ECEL1O95672 775 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 CTSBP07858 339 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 MAOBP27338 520 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 RPS26P11Q5JNZ5 115 aaPredicted RBP9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 NKAPLQ5M9Q1 402 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 DUSP9Q99956 384 aaKnown RBP9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 SPG7Q9UQ90 795 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 CRYBG1Q9Y4K1 1723 aa9.33□□□□□ -0.92
PTP4A1-202ENST00000470661 SPATA31A1Q5TZJ5 1347 aa9.32□□□□□ -0.92
PTP4A1-202ENST00000470661 COL19A1Q14993 1142 aa9.32□□□□□ -0.92
PTP4A1-202ENST00000470661 C3orf58Q8NDZ4 430 aa9.32□□□□□ -0.92
PTP4A1-202ENST00000470661 RNF208Q9H0X6 261 aa9.32□□□□□ -0.92
PTP4A1-202ENST00000470661 SEMA6BQ9H3T3 888 aa9.32□□□□□ -0.92
PTP4A1-202ENST00000470661 GPN3Q9UHW5 284 aaPredicted RBP9.32□□□□□ -0.92
PTP4A1-202ENST00000470661 CD163L1Q9NR16 1453 aa9.32□□□□□ -0.92
PTP4A1-202ENST00000470661 K7ELQ4 463 aaPredicted RBP9.31□□□□□ -0.92
PTP4A1-202ENST00000470661 POU4F3Q15319 338 aa9.31□□□□□ -0.92
PTP4A1-202ENST00000470661 USP47Q96K76 1375 aa9.31□□□□□ -0.92
PTP4A1-202ENST00000470661 NRAPQ86VF7 1730 aa9.31□□□□□ -0.92
PTP4A1-202ENST00000470661 PHRF1Q9P1Y6 1649 aaKnown RBP9.31□□□□□ -0.92
PTP4A1-202ENST00000470661 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
PTP4A1-202ENST00000470661 COL14A1Q05707 1796 aaKnown RBP9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 A0A1W2PP64 1363 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 SBNO2Q9Y2G9 1366 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 FBXO24O75426 580 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 XRCC5P13010 732 aaKnown RBP9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 GSTT1P30711 240 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 TAGLNQ01995 201 aaKnown RBP9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 FDX2Q6P4F2 183 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 PTF1AQ7RTS3 328 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 HDGFL2Q7Z4V5 671 aaPredicted RBP9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 DDX54Q8TDD1 881 aaKnown RBP9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 LTV1Q96GA3 475 aaPredicted RBP9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 CEP41Q9BYV8 373 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 C12orf49Q9H741 205 aa9.3□□□□□ -0.92
PTP4A1-202ENST00000470661 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 NRKQ7Z2Y5 1582 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 DYRK3O43781 588 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 ADAM23O75077 832 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 TRIM37O94972 964 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 CYP11A1P05108 521 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 GNA15P30679 374 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 PREPP48147 710 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 TPTE2Q6XPS3 522 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 TOM1L2Q6ZVM7 507 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 FBXO33Q7Z6M2 555 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 TMPRSS13Q9BYE2 586 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
PTP4A1-202ENST00000470661 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 NWD2Q9ULI1 1742 aa9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 GIPC1O14908 333 aa9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 HSPA5P11021 654 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 TMCO4Q5TGY1 634 aa9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 ANKRD34AQ69YU3 496 aa9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 TCP11L2Q8N4U5 519 aa9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 UTP4Q969X6 686 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 FAM46AQ96IP4 442 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 ZC3H12CQ9C0D7 883 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 ZFYVE1Q9HBF4 777 aa9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
PTP4A1-202ENST00000470661 AKAP12Q02952 1782 aa9.27□□□□□ -0.92
PTP4A1-202ENST00000470661 CPDO75976 1380 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 MEGF11A6BM72 1044 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 SART1O43290 800 aaKnown RBP9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 ITGB7P26010 798 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 TMF1P82094 1093 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 ARMC10Q8N2F6 343 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 FAM161BQ96MY7 647 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms