RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PRR13Q9NZ81 148 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 PCOLCE2Q9UKZ9 415 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 COL17A1Q9UMD9 1497 aaPredicted RBP7.83□□□□□ -1.16
RBM39-227ENST00000470563 B2RBV5 119 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 NRG1Q02297 640 aaPredicted RBP7.83□□□□□ -1.16
RBM39-227ENST00000470563 TMEM67Q5HYA8 995 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 FDX2Q6P4F2 183 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 CDC37L1Q7L3B6 337 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 NACC1Q96RE7 527 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 CEP41Q9BYV8 373 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 RRAGCQ9HB90 399 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.83□□□□□ -1.16
RBM39-227ENST00000470563 AP4E1Q9UPM8 1137 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 CSADQ9Y600 493 aa7.83□□□□□ -1.16
RBM39-227ENST00000470563 ADCY3O60266 1144 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 CAPNS1P04632 268 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 CHMP4BP1P59074 171 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 NKG7Q16617 165 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 RNF187Q5TA31 235 aaPredicted RBP7.82□□□□□ -1.16
RBM39-227ENST00000470563 SMYD4Q8IYR2 804 aaPredicted RBP7.82□□□□□ -1.16
RBM39-227ENST00000470563 PPP1R13LQ8WUF5 828 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 VWCEQ96DN2 955 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 SPATA9Q9BWV2 254 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 PICK1Q9NRD5 415 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 FANCLQ9NW38 375 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 ACTL7BQ9Y614 415 aa7.82□□□□□ -1.16
RBM39-227ENST00000470563 ANKRD34BA5PLL1 514 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 C9orf172C9J069 976 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 SSRP1Q08945 709 aaKnown RBP7.81□□□□□ -1.16
RBM39-227ENST00000470563 TCEA2Q15560 299 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 PRAMEF13Q5VWM6 474 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 KIAA1211LQ6NV74 962 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.81□□□□□ -1.16
RBM39-227ENST00000470563 SPATC1Q76KD6 591 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 TMEM192Q8IY95 271 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 ZBTB38Q8NAP3 1195 aaPredicted RBP7.81□□□□□ -1.16
RBM39-227ENST00000470563 DNAJB8Q8NHS0 232 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 ZCRB1Q8TBF4 217 aaKnown RBP7.81□□□□□ -1.16
RBM39-227ENST00000470563 FAM46AQ96IP4 442 aaKnown RBP7.81□□□□□ -1.16
RBM39-227ENST00000470563 COX4I2Q96KJ9 171 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 PSMG3-AS1Q96PY0 264 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 PIDD1Q9HB75 910 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 SUSD2Q9UGT4 822 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 PLAAQ9Y263 795 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 CCDC180Q9P1Z9 1646 aa7.81□□□□□ -1.16
RBM39-227ENST00000470563 KDM2BQ8NHM5 1336 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 ESYT3A0FGR9 886 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 CCDC85CA6NKD9 419 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 DIAPH1O60610 1272 aaKnown RBP7.8□□□□□ -1.16
RBM39-227ENST00000470563 ASPAP45381 313 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 RNF4P78317 190 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 GNPTABQ3T906 1256 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 PPFIBP1Q86W92 1011 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 PHACTR4Q8IZ21 702 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 BEND7Q8N7W2 519 aaPredicted RBP7.8□□□□□ -1.16
RBM39-227ENST00000470563 ZNF513Q8N8E2 541 aaPredicted RBP7.8□□□□□ -1.16
RBM39-227ENST00000470563 FBXL18Q96ME1 805 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 SLC6A18Q96N87 628 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 KIF2CQ99661 725 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 YIPF2Q9BWQ6 316 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 KLHL25Q9H0H3 589 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 SLKQ9H2G2 1235 aaPredicted RBP7.8□□□□□ -1.16
RBM39-227ENST00000470563 AKTIPQ9H8T0 292 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 KANSL2Q9H9L4 492 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 FAM105AQ9NUU6 356 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 PTCH2Q9Y6C5 1203 aa7.8□□□□□ -1.16
RBM39-227ENST00000470563 A0A087WZG4 1122 aa7.79□□□□□ -1.16
RBM39-227ENST00000470563 AGRPO00253 132 aa7.79□□□□□ -1.16
RBM39-227ENST00000470563 CLEC3AO75596 197 aa7.79□□□□□ -1.16
RBM39-227ENST00000470563 RFPL3O75679 317 aa7.79□□□□□ -1.16
RBM39-227ENST00000470563 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
RBM39-227ENST00000470563 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
RBM39-227ENST00000470563 POLR2BP30876 1174 aaKnown RBP7.79□□□□□ -1.16
RBM39-227ENST00000470563 ARMCX6Q7L4S7 300 aa7.79□□□□□ -1.16
RBM39-227ENST00000470563 C12orf50Q8NA57 414 aaPredicted RBP7.79□□□□□ -1.16
RBM39-227ENST00000470563 ASPNQ9BXN1 380 aa7.79□□□□□ -1.16
RBM39-227ENST00000470563 CEP131Q9UPN4 1083 aa7.79□□□□□ -1.16
RBM39-227ENST00000470563 KRBA1A5PL33 1030 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 HCLS1P14317 486 aaPredicted RBP7.78□□□□□ -1.16
RBM39-227ENST00000470563 PTPROQ16827 1216 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 SEZ6L2Q6UXD5 910 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 DYMQ7RTS9 669 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 PODNQ7Z5L7 613 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 UBE3DQ7Z6J8 389 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 DZIP1LQ8IYY4 767 aaKnown RBP7.78□□□□□ -1.16
RBM39-227ENST00000470563 RCC1LQ96I51 464 aaKnown RBP7.78□□□□□ -1.16
RBM39-227ENST00000470563 HAUS7Q99871 368 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 LEMD3Q9Y2U8 911 aa7.78□□□□□ -1.16
RBM39-227ENST00000470563 CBFA2T2O43439 604 aa7.77□□□□□ -1.17
RBM39-227ENST00000470563 GBP1P32455 592 aa7.77□□□□□ -1.17
RBM39-227ENST00000470563 PREPP48147 710 aa7.77□□□□□ -1.17
RBM39-227ENST00000470563 ADGRE1Q14246 886 aa7.77□□□□□ -1.17
RBM39-227ENST00000470563 NBPF12Q5TAG4 269 aaPredicted RBP7.77□□□□□ -1.17
RBM39-227ENST00000470563 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.77□□□□□ -1.17
RBM39-227ENST00000470563 RNF141Q8WVD5 230 aa7.77□□□□□ -1.17
RBM39-227ENST00000470563 KISS1RQ969F8 398 aaPredicted RBP7.77□□□□□ -1.17
RBM39-227ENST00000470563 APBA2Q99767 749 aa7.77□□□□□ -1.17
RBM39-227ENST00000470563 SPC25Q9HBM1 224 aa7.77□□□□□ -1.17
RBM39-227ENST00000470563 DNAJC6O75061 913 aa7.76□□□□□ -1.17
RBM39-227ENST00000470563 DRD2P14416 443 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms