RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 CWC22Q9HCG8 908 aaKnown RBP23.52■■□□□ 1.36
GCFC2-207ENST00000470503 SHROOM1Q2M3G4 852 aaPredicted RBP23.51■■□□□ 1.35
GCFC2-207ENST00000470503 CATSPERGQ6ZRH7 1159 aa23.51■■□□□ 1.35
GCFC2-207ENST00000470503 APBA2Q99767 749 aa23.51■■□□□ 1.35
GCFC2-207ENST00000470503 RIOK1Q9BRS2 568 aaKnown RBP23.51■■□□□ 1.35
GCFC2-207ENST00000470503 PAGR1Q9BTK6 254 aa23.51■■□□□ 1.35
GCFC2-207ENST00000470503 ANTXR1Q9H6X2 564 aa23.51■■□□□ 1.35
GCFC2-207ENST00000470503 EXOC6BQ9Y2D4 811 aa23.51■■□□□ 1.35
GCFC2-207ENST00000470503 FOCADQ5VW36 1801 aa23.5■■□□□ 1.35
GCFC2-207ENST00000470503 MNX1P50219 401 aaPredicted RBP23.5■■□□□ 1.35
GCFC2-207ENST00000470503 RAB3GAP1Q15042 981 aa23.5■■□□□ 1.35
GCFC2-207ENST00000470503 PORCNQ9H237 461 aa23.5■■□□□ 1.35
GCFC2-207ENST00000470503 MAGEB6P1A0A0J9YX57 407 aa23.49■■□□□ 1.35
GCFC2-207ENST00000470503 POLR3DP05423 398 aaPredicted RBP23.49■■□□□ 1.35
GCFC2-207ENST00000470503 CACNB2Q08289 660 aaPredicted RBP23.49■■□□□ 1.35
GCFC2-207ENST00000470503 MAP2K5Q13163 448 aa23.49■■□□□ 1.35
GCFC2-207ENST00000470503 RPAP2Q8IXW5 612 aaPredicted RBP23.49■■□□□ 1.35
GCFC2-207ENST00000470503 CLASRPQ8N2M8 674 aaKnown RBP23.49■■□□□ 1.35
GCFC2-207ENST00000470503 RHPN1Q8TCX5 695 aa23.49■■□□□ 1.35
GCFC2-207ENST00000470503 GDF15Q99988 308 aa23.49■■□□□ 1.35
GCFC2-207ENST00000470503 CRNKL1Q9BZJ0 848 aaKnown RBP23.49■■□□□ 1.35
GCFC2-207ENST00000470503 STAP2Q9UGK3 403 aa23.49■■□□□ 1.35
GCFC2-207ENST00000470503 ZBED9Q6R2W3 1325 aa23.49■■□□□ 1.35
GCFC2-207ENST00000470503 HMMRO75330 724 aa23.48■■□□□ 1.35
GCFC2-207ENST00000470503 KIF1BPQ96EK5 621 aa23.48■■□□□ 1.35
GCFC2-207ENST00000470503 EDC3Q96F86 508 aaKnown RBP23.48■■□□□ 1.35
GCFC2-207ENST00000470503 SLC15A5A6NIM6 579 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 PEX10O60683 326 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 VCAM1P19320 739 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 SHMT1P34896 483 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 GABPAQ06546 454 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 SLC9C2Q5TAH2 1124 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 MFSD14CQ5VZR4 134 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 GPR153Q6NV75 609 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 C7orf61Q8IZ16 206 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 CHMP4BQ9H444 224 aaKnown RBP23.47■■□□□ 1.35
GCFC2-207ENST00000470503 NDUFB9Q9Y6M9 179 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 IVNS1ABPQ9Y6Y0 642 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 CDK5RAP2Q96SN8 1893 aa23.47■■□□□ 1.35
GCFC2-207ENST00000470503 HOXC6P09630 235 aa23.46■■□□□ 1.35
GCFC2-207ENST00000470503 RANBP2P49792 3224 aaKnown RBP23.46■■□□□ 1.35
GCFC2-207ENST00000470503 PLCD1P51178 756 aa23.46■■□□□ 1.35
GCFC2-207ENST00000470503 POTEEQ6S8J3 1075 aa23.46■■□□□ 1.35
GCFC2-207ENST00000470503 MSCO60682 206 aa23.45■■□□□ 1.34
GCFC2-207ENST00000470503 CNMDO75829 334 aa23.45■■□□□ 1.34
GCFC2-207ENST00000470503 COL6A1P12109 1028 aa23.45■■□□□ 1.34
GCFC2-207ENST00000470503 PDE6AP16499 860 aa23.45■■□□□ 1.34
GCFC2-207ENST00000470503 PTPREP23469 700 aa23.45■■□□□ 1.34
GCFC2-207ENST00000470503 ZYXQ15942 572 aaKnown RBP23.45■■□□□ 1.34
GCFC2-207ENST00000470503 LHX8Q68G74 356 aa23.45■■□□□ 1.34
GCFC2-207ENST00000470503 HOXC10Q9NYD6 342 aa23.45■■□□□ 1.34
GCFC2-207ENST00000470503 RAB11FIP3O75154 756 aa23.44■■□□□ 1.34
GCFC2-207ENST00000470503 IFIT2P09913 472 aaKnown RBP23.44■■□□□ 1.34
GCFC2-207ENST00000470503 ACER1Q8TDN7 264 aa23.44■■□□□ 1.34
GCFC2-207ENST00000470503 PANK1Q8TE04 598 aa23.44■■□□□ 1.34
GCFC2-207ENST00000470503 IL1RAPL2Q9NP60 686 aa23.44■■□□□ 1.34
GCFC2-207ENST00000470503 MCM9Q9NXL9 1143 aa23.44■■□□□ 1.34
GCFC2-207ENST00000470503 SWAP70Q9UH65 585 aa23.44■■□□□ 1.34
GCFC2-207ENST00000470503 PLXNB2O15031 1838 aa23.44■■□□□ 1.34
GCFC2-207ENST00000470503 COG2Q14746 738 aa23.43■■□□□ 1.34
GCFC2-207ENST00000470503 CCL14Q16627 93 aa23.43■■□□□ 1.34
GCFC2-207ENST00000470503 RPAP3Q9H6T3 665 aaPredicted RBP23.43■■□□□ 1.34
GCFC2-207ENST00000470503 DDX19BQ9UMR2 479 aa23.43■■□□□ 1.34
GCFC2-207ENST00000470503 MYH1P12882 1939 aa23.43■■□□□ 1.34
GCFC2-207ENST00000470503 MYO5AQ9Y4I1 1855 aaKnown RBP23.43■■□□□ 1.34
GCFC2-207ENST00000470503 SPDYE16A6NNV3 312 aaPredicted RBP23.42■■□□□ 1.34
GCFC2-207ENST00000470503 STRNO43815 780 aa23.42■■□□□ 1.34
GCFC2-207ENST00000470503 CCND3P30281 292 aaPredicted RBP23.42■■□□□ 1.34
GCFC2-207ENST00000470503 GUCY1A2P33402 732 aa23.42■■□□□ 1.34
GCFC2-207ENST00000470503 GRB14Q14449 540 aa23.42■■□□□ 1.34
GCFC2-207ENST00000470503 WDR78Q5VTH9 848 aa23.42■■□□□ 1.34
GCFC2-207ENST00000470503 DCP1AQ9NPI6 582 aaPredicted RBP23.42■■□□□ 1.34
GCFC2-207ENST00000470503 ZMYND8Q9ULU4 1186 aaPredicted RBP23.42■■□□□ 1.34
GCFC2-207ENST00000470503 PFASO15067 1338 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 ZNF532Q9HCE3 1301 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 ATP2B2Q01814 1243 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 SEPT2Q15019 361 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 LRIT3Q3SXY7 679 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 TMEM179Q6ZVK1 233 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 MB21D1Q8N884 522 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 LPAR1Q92633 364 aa23.41■■□□□ 1.34
GCFC2-207ENST00000470503 GOLIM4O00461 696 aa23.4■■□□□ 1.34
GCFC2-207ENST00000470503 SHCBP1Q8NEM2 672 aa23.4■■□□□ 1.34
GCFC2-207ENST00000470503 SH2D4AQ9H788 454 aa23.4■■□□□ 1.34
GCFC2-207ENST00000470503 ATP8A2Q9NTI2 1148 aa23.4■■□□□ 1.34
GCFC2-207ENST00000470503 BTBD7Q9P203 1132 aa23.4■■□□□ 1.34
GCFC2-207ENST00000470503 TCRBV5S4A2TA0A5A2 114 aa23.39■■□□□ 1.33
GCFC2-207ENST00000470503 MPHOSPH10O00566 681 aaKnown RBP23.39■■□□□ 1.33
GCFC2-207ENST00000470503 TDHQ8IZJ6 230 aa23.39■■□□□ 1.33
GCFC2-207ENST00000470503 CCDC17Q96LX7 622 aa23.39■■□□□ 1.33
GCFC2-207ENST00000470503 DNAJC2Q99543 621 aaKnown RBP23.39■■□□□ 1.33
GCFC2-207ENST00000470503 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.39■■□□□ 1.33
GCFC2-207ENST00000470503 ZBTB40Q9NUA8 1239 aa23.39■■□□□ 1.33
GCFC2-207ENST00000470503 SLC5A4Q9NY91 659 aa23.39■■□□□ 1.33
GCFC2-207ENST00000470503 DDX20Q9UHI6 824 aaKnown RBP23.39■■□□□ 1.33
GCFC2-207ENST00000470503 SZT2Q5T011 3432 aa23.39■■□□□ 1.33
GCFC2-207ENST00000470503 SOX1O00570 391 aaPredicted RBP23.38■■□□□ 1.33
GCFC2-207ENST00000470503 MAGEA10P43363 369 aaPredicted RBP23.38■■□□□ 1.33
GCFC2-207ENST00000470503 AMOTL1Q8IY63 956 aa23.38■■□□□ 1.33
GCFC2-207ENST00000470503 ATP5JP18859 108 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms