RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 USP17L15C9J2P7 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L13C9JLJ4 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L11C9JVI0 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L18D6R9N7 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L22D6RA61 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L17D6RBQ6 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L19D6RCP7 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L20D6RJB6 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 PEX10O60683 326 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 BAG3O95817 575 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 HOXC6P09630 235 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 PLCG2P16885 1265 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 USP17L24Q0WX57 530 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 RASGRF1Q13972 1273 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 MVPQ14764 893 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 C1orf53Q5VUE5 145 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 ATF7IPQ6VMQ6 1270 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 DPP9Q86TI2 863 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 ANP32EQ9BTT0 268 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 SLC5A4Q9NY91 659 aa10.96□□□□□ -0.65
SYNGAP1-205ENST00000470232 STRNO43815 780 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 USP14P54578 494 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 MRPS5P82675 430 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 MAP3K12Q12852 859 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 RRP1BQ14684 758 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 TRIM60Q495X7 471 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 ASB2Q96Q27 587 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 C1QTNF1Q9BXJ1 281 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 PDLIM7Q9NR12 457 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 FLRT1Q9NZU1 646 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 RAI14Q9P0K7 980 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 THEGQ9P2T0 379 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 LTBP2Q14767 1821 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 FRMPD3Q5JV73 1810 aa10.95□□□□□ -0.66
SYNGAP1-205ENST00000470232 TRIM43BA6NCK2 446 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 SEPT4O43236 478 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 RAG1P15918 1043 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 DNAJB2P25686 324 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 CYP2C19P33261 490 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 TIMM10P62072 90 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 GRB14Q14449 540 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 SNX17Q15036 470 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 AKNAD1Q5T1N1 836 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 GORABQ5T7V8 394 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 OLFML2BQ68BL8 750 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 PPM1EQ8WY54 764 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 TRIM43Q96BQ3 446 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 NSUN4Q96CB9 384 aaKnown RBP10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 UHRF1Q96T88 793 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 ZNF576Q9H609 170 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 EMILIN3Q9NT22 766 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 RAPGEFL1Q9UHV5 662 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 NDUFB9Q9Y6M9 179 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 RLFQ13129 1914 aa10.94□□□□□ -0.66
SYNGAP1-205ENST00000470232 HLA-DOAP06340 250 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 CLTBP09497 229 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 UBTFL1P0CB47 393 aaPredicted RBP10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 CYBAP13498 195 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 ADORA1P30542 326 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 ADCYAP1R1P41586 468 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 TLE2Q04725 743 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 FPGSQ05932 587 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 CATSPERGQ6ZRH7 1159 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 SH3RF1Q7Z6J0 888 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 USP38Q8NB14 1042 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 NPLOC4Q8TAT6 608 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 TIFAQ96CG3 184 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 XAGE2Q96GT9 111 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 C12orf42Q96LP6 360 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 FEZ1Q99689 392 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 LRP2BPQ9P2M1 347 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 ZBTB21Q9ULJ3 1066 aa10.93□□□□□ -0.66
SYNGAP1-205ENST00000470232 GDF11O95390 407 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 LRRC41Q15345 812 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 LBX2Q6XYB7 198 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 SPATA5Q8NB90 893 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 TRPV1Q8NER1 839 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 FERMT2Q96AC1 680 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 NEUROD6Q96NK8 337 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 TMEM39AQ9NV64 488 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 HOXC10Q9NYD6 342 aa10.92□□□□□ -0.66
SYNGAP1-205ENST00000470232 A0A1B0GUL7 405 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 KIAA0355O15063 1070 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 CNMDO75829 334 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 ANO1Q5XXA6 986 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 CCDC129Q6ZRS4 1044 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 RNF180Q86T96 592 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 SH3RF3Q8TEJ3 882 aaPredicted RBP10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 TGFBRAP1Q8WUH2 860 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 COPRSQ9NQ92 184 aa10.91□□□□□ -0.66
SYNGAP1-205ENST00000470232 HMG20BQ9P0W2 317 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms