RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 GOLGA6L10A0A0M3HER8 536 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 A0A1W2PRU2 124 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 H0Y3Z8 333 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 J3QL48 77 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 TNFRSF10AO00220 468 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 SPTLC2O15270 562 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 P4HA2O15460 535 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 PPP1R12BO60237 982 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 ICMTO60725 284 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 PTCD1O75127 700 aaKnown RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 ZIC2O95409 532 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 S100BP04271 92 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 PYGLP06737 847 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 ELF1P32519 619 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 CCT8P50990 548 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 MRPL12P52815 198 aaKnown RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 UBXN2AP68543 259 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 FOXK2Q01167 660 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 RASA2Q15283 850 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 TLR1Q15399 786 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 BOLA3Q53S33 107 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 ARMC3Q5W041 872 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 CEP135Q66GS9 1140 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 CCSAPQ6IQ19 270 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 IRGCQ6NXR0 463 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 MTHFD1LQ6UB35 978 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 SYT10Q6XYQ8 523 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 LURAP1LQ8IV03 231 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 C10orf67Q8IYJ2 551 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 SLC7A5P1Q8MH63 180 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 PRPF38AQ8NAV1 312 aaKnown RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 KDF1Q8NAX2 398 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 SNIP1Q8TAD8 396 aaKnown RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 WDR66Q8TBY9 1149 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 BICD2Q8TD16 824 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 EZH1Q92800 747 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 LRRC45Q96CN5 670 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 C8orf76Q96K31 380 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 TSGA10Q9BZW7 698 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 BRD8Q9H0E9 1235 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 OSBPL5Q9H0X9 879 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 ZFAND3Q9H8U3 227 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 TUBA8Q9NY65 449 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 SEPT10Q9P0V9 454 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 SCHIP1Q9P0W5 487 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 ZNF69Q9UC07 566 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 TBK1Q9UHD2 729 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 RRP15Q9Y3B9 282 aaKnown RBP5.85□□□□□ -1.47
COL3A1-205ENST00000470167 TTLL3Q9Y4R7 772 aa5.85□□□□□ -1.47
COL3A1-205ENST00000470167 A0A0B4J203 849 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 BAIAP3O94812 1187 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 FGFR1OPO95684 399 aaKnown RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 USP5P45974 858 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 CCNHP51946 323 aaPredicted RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 SMTNP53814 917 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 MARSP56192 900 aaKnown RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 NEDD9Q14511 834 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 SLMAPQ14BN4 828 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 SUZ12Q15022 739 aaKnown RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 MTFR1Q15390 333 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 EMC10Q5UCC4 262 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 ALKBH2Q6NS38 261 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 FIP1L1Q6UN15 594 aaKnown RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 BEND5Q7L4P6 421 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 ARMC9Q7Z3E5 817 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 AFAP1Q8N556 730 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 C3orf20Q8ND61 904 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 GSDMBQ8TAX9 411 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 FAM81AQ8TBF8 368 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 SUN5Q8TC36 379 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 DHX38Q92620 1227 aaKnown RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 ZNF75CPQ92670 426 aaPredicted RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 CNKSR1Q969H4 720 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 COL26A1Q96A83 441 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 TBC1D31Q96DN5 1066 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 SERINC2Q96SA4 455 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 NAP1L3Q99457 506 aaPredicted RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 C2orf49Q9BVC5 232 aaPredicted RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 ABCG4Q9H172 646 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 TAOK3Q9H2K8 898 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 PIF1Q9H611 641 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 AS3MTQ9HBK9 375 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 IL20Q9NYY1 176 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 UBAP1Q9NZ09 502 aa5.84□□□□□ -1.47
COL3A1-205ENST00000470167 LUC7L2Q9Y383 392 aaKnown RBP5.84□□□□□ -1.47
COL3A1-205ENST00000470167 LINC00854A0A1B0GVQ3 168 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 TTC24A2A3L6 582 aaPredicted RBP5.83□□□□□ -1.48
COL3A1-205ENST00000470167 STXBP3O00186 592 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 KDM1AO60341 852 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 TBCAO75347 108 aaKnown RBP5.83□□□□□ -1.48
COL3A1-205ENST00000470167 KCNA6P17658 529 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 KIF5BP33176 963 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 S100A5P33763 92 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 CASP2P42575 452 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 MATR3P43243 847 aaKnown RBP eCLIP5.83□□□□□ -1.48
COL3A1-205ENST00000470167 NEK2P51955 445 aa5.83□□□□□ -1.48
COL3A1-205ENST00000470167 WDR4P57081 412 aaKnown RBP5.83□□□□□ -1.48
COL3A1-205ENST00000470167 RELBQ01201 579 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms