RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 DCP1AQ9NPI6 582 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-203ENST00000469739 DOCK2Q92608 1830 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 MMP1P03956 469 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 SLURP2P0DP57 97 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 MKRN3Q13064 507 aaKnown RBP10.82□□□□□ -0.68
TOP3A-203ENST00000469739 FOXP4Q8IVH2 680 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-203ENST00000469739 SH3RF3Q8TEJ3 882 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-203ENST00000469739 EPSTI1Q96J88 318 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 PNPLA7Q6ZV29 1317 aa10.82□□□□□ -0.68
TOP3A-203ENST00000469739 TRIM37O94972 964 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 CMA1P23946 247 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 DHX58Q96C10 678 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 MAP3K14Q99558 947 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 VAT1LQ9HCJ6 419 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 SERTAD1Q9UHV2 236 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 PCDHA5Q9Y5H7 936 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 C6orf229H3BNL8 230 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 TFAP4Q01664 338 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 PLIN2Q99541 437 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 A0A1W2PQ27 194 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 A0A1W2PQ64 194 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 A0A1W2PQD8 194 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 SKILP12757 684 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 STX17P56962 302 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 NAA30Q147X3 362 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-203ENST00000469739 FBXO33Q7Z6M2 555 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 SMYD4Q8IYR2 804 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-203ENST00000469739 CNPY4Q8N129 248 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 DPF2Q92785 391 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 CRNKL1Q9BZJ0 848 aaKnown RBP10.81□□□□□ -0.68
TOP3A-203ENST00000469739 NAT10Q9H0A0 1025 aaKnown RBP10.81□□□□□ -0.68
TOP3A-203ENST00000469739 MKNK2Q9HBH9 465 aa10.81□□□□□ -0.68
TOP3A-203ENST00000469739 UFL1O94874 794 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 DEXIO95424 95 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 SERPINC1P01008 464 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 EIF6P56537 245 aaKnown RBP10.8□□□□□ -0.68
TOP3A-203ENST00000469739 SEC23AQ15436 765 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 ATL3Q6DD88 541 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 METTL16Q86W50 562 aaKnown RBP10.8□□□□□ -0.68
TOP3A-203ENST00000469739 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 SEPT12Q8IYM1 358 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 STAG2Q8N3U4 1231 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 RPGRQ92834 1020 aaKnown RBP10.8□□□□□ -0.68
TOP3A-203ENST00000469739 UIMC1Q96RL1 719 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 NYXQ9GZU5 481 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 CSRNP2Q9H175 543 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 TMX1Q9H3N1 280 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.8□□□□□ -0.68
TOP3A-203ENST00000469739 V9GYY5 206 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-203ENST00000469739 ATRNO75882 1429 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 TM4SF1P30408 202 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 PDE4BQ07343 736 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 PIK3AP1Q6ZUJ8 805 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 SRBD1Q8N5C6 995 aaKnown RBP10.8□□□□□ -0.68
TOP3A-203ENST00000469739 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 KRI1Q8N9T8 703 aaKnown RBP10.8□□□□□ -0.68
TOP3A-203ENST00000469739 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 FEZ1Q99689 392 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 MXD3Q9BW11 206 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 SBF2Q86WG5 1849 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 TAF1LQ8IZX4 1826 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 COL24A1Q17RW2 1714 aa10.8□□□□□ -0.68
TOP3A-203ENST00000469739 VWA3AA6NCI4 1184 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 LDHBP07195 334 aaKnown RBP10.79□□□□□ -0.68
TOP3A-203ENST00000469739 MCM7P33993 719 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 PLCD1P51178 756 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-203ENST00000469739 PICALMQ13492 652 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 CFAP100Q494V2 611 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-203ENST00000469739 CTCFLQ8NI51 663 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-203ENST00000469739 MYH13Q9UKX3 1938 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 CCDC196A0A1B0GTZ2 297 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
TOP3A-203ENST00000469739 NLRP5P59047 1200 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 CLEC10AQ8IUN9 316 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 FANCLQ9NW38 375 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 LY75O60449 1722 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 WDR19Q8NEZ3 1342 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 RTL9Q8NET4 1388 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 TMEM232C9JQI7 657 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 TNNT1P13805 278 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 TROAPQ12815 778 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 PKN1Q16512 942 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 LRRC8AQ8IWT6 810 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 OGFRQ9NZT2 677 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 MAPK8IP1Q9UQF2 711 aa10.79□□□□□ -0.68
TOP3A-203ENST00000469739 GPSM2P81274 684 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 PRR5LQ6MZQ0 368 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 WASF1Q92558 559 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 EEF2KMTQ96G04 330 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-203ENST00000469739 BLZF1Q9H2G9 400 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 AFF2P51816 1311 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 CNTNAP4Q9C0A0 1308 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 BMP6P22004 513 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 NLRP12P59046 1061 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 MSL1Q68DK7 614 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 KRBA2Q6ZNG9 492 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms