RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 SCYL2Q6P3W7 929 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 MYO1AQ9UBC5 1043 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 KIAA0556O60303 1618 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 LOC102724428A0A0B4J2F2 783 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 SIK1P57059 783 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 HDAC1Q13547 482 aaPredicted RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 RYBPQ8N488 228 aaPredicted RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 GABPB2Q8TAK5 448 aaPredicted RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 SLC10A4Q96EP9 437 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 PPP1R16BQ96T49 567 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 PARP2Q9UGN5 583 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 ZFYVE9O95405 1425 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 ATF7P17544 494 aaPredicted RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 ARHGAP44Q17R89 818 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 ABCB5Q2M3G0 1257 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 CSRNP1Q96S65 589 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 ANKFY1Q9P2R3 1169 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 ARPP21Q9UBL0 812 aaPredicted RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 MTRF1LQ9UGC7 380 aaKnown RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 LUC7L2Q9Y383 392 aaKnown RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 POLGP54098 1239 aaPredicted RBP7.84□□□□□ -1.15
CD46-212ENST00000469535 ZSCAN23Q3MJ62 389 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 CSRNP2Q9H175 543 aa7.84□□□□□ -1.15
CD46-212ENST00000469535 GOLGA6CA6NDK9 693 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 GOLGA6BA6NDN3 693 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 SMCO2A6NFE2 343 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 TMEM232C9JQI7 657 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 ZBTB7AO95365 584 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 TNNC2P02585 160 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 GOLGA6DP0CG33 693 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 GOLGA8HP0CJ92 632 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 SND1Q7KZF4 910 aaKnown RBP eCLIP7.84□□□□□ -1.169e-12■■■■□ 20.8
CD46-212ENST00000469535 PARD3BQ8TEW8 1205 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 FTOQ9C0B1 505 aaKnown RBP eCLIP7.84□□□□□ -1.16
CD46-212ENST00000469535 GOLGA6AQ9NYA3 693 aa7.84□□□□□ -1.16
CD46-212ENST00000469535 MAN1A1P33908 653 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 HSPA1LP34931 641 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 CYP2J2P51589 502 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 UBXN2AP68543 259 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 PPARAQ07869 468 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 EEPD1Q7L9B9 569 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 MCF2L2Q86YR7 1114 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 SDR42E1Q8WUS8 393 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 SKA2Q8WVK7 121 aaPredicted RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 UBLCP1Q8WVY7 318 aaPredicted RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 SEPT10Q9P0V9 454 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 ANGEL1Q9UNK9 670 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 NUB1Q9Y5A7 615 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 LRRIQ4A6NIV6 560 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 FAM160B1Q5W0V3 765 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 CABP7Q86V35 215 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 FMNL3Q8IVF7 1028 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 KCNJ14Q9UNX9 436 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 IBTKQ9P2D0 1353 aaPredicted RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 XPAP23025 273 aaPredicted RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 MAPK8IP2Q13387 824 aaPredicted RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 ZNF569Q5MCW4 686 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 LZTS2Q9BRK4 669 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 PCDHB15Q9Y5E8 787 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 TARBP1Q13395 1621 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 RPRD2Q5VT52 1461 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 ESYT2A0FGR8 921 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 USP17L12C9JPN9 530 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 USP17L21D6R901 530 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 SKILP12757 684 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 PLCB4Q15147 1175 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 FBXO11Q86XK2 927 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 CMTR1Q8N1G2 835 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 C2orf69Q8N8R5 385 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 FAM227BQ96M60 508 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 USP19O94966 1318 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 IREB2P48200 963 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 TBC1D8BQ0IIM8 1120 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 REXO1Q8N1G1 1221 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 SEC62Q99442 399 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 SLC27A2O14975 620 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 RPS6KB1P23443 525 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 CHRNDQ07001 517 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 GANCQ8TET4 914 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 IPO4Q8TEX9 1081 aaKnown RBP7.83□□□□□ -1.16
CD46-212ENST00000469535 PSTPIP2Q9H939 334 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 VPS54Q9P1Q0 977 aa7.83□□□□□ -1.16
CD46-212ENST00000469535 YEATS2Q9ULM3 1422 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 ZSCAN20P17040 1043 aaPredicted RBP7.82□□□□□ -1.16
CD46-212ENST00000469535 ALDH3A1P30838 453 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 CLUL1Q15846 466 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 CCDC93Q567U6 631 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 BEND3Q5T5X7 828 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 TTLL7Q6ZT98 887 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 MIGA2Q7L4E1 593 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 VPS52Q8N1B4 723 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 CSGALNACT2Q8N6G5 542 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 CTTNBP2NLQ9P2B4 639 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 SEPT9Q9UHD8 586 aaPredicted RBP7.82□□□□□ -1.16
CD46-212ENST00000469535 POLIQ9UNA4 740 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 COL17A1Q9UMD9 1497 aaPredicted RBP7.82□□□□□ -1.16
CD46-212ENST00000469535 CCDC160A6NGH7 325 aa7.82□□□□□ -1.16
CD46-212ENST00000469535 POLR2DO15514 142 aaKnown RBP7.82□□□□□ -1.16
CD46-212ENST00000469535 KRT81Q14533 505 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms