RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 NDUFB9Q9Y6M9 179 aa17.75■□□□□ 0.43
SNED1-209ENST00000469006 MYH1P12882 1939 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L15C9J2P7 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L13C9JLJ4 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L11C9JVI0 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L18D6R9N7 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L22D6RA61 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L17D6RBQ6 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L19D6RCP7 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L20D6RJB6 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 IGSF3O75054 1194 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP5P45974 858 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 MDM2Q00987 491 aaPredicted RBP17.74■□□□□ 0.43
SNED1-209ENST00000469006 USP17L24Q0WX57 530 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 WDR78Q5VTH9 848 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 MIGA1Q8NAN2 632 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 SSH3Q8TE77 659 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 MTMR10Q9NXD2 777 aa17.74■□□□□ 0.43
SNED1-209ENST00000469006 TLR7Q9NYK1 1049 aaKnown RBP17.74■□□□□ 0.43
SNED1-209ENST00000469006 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
SNED1-209ENST00000469006 SURF6O75683 361 aaKnown RBP17.73■□□□□ 0.43
SNED1-209ENST00000469006 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
SNED1-209ENST00000469006 GLRX3O76003 335 aaKnown RBP17.73■□□□□ 0.43
SNED1-209ENST00000469006 CCNA1P78396 465 aa17.73■□□□□ 0.43
SNED1-209ENST00000469006 RAB3GAP1Q15042 981 aa17.73■□□□□ 0.43
SNED1-209ENST00000469006 TATDN1Q6P1N9 297 aa17.73■□□□□ 0.43
SNED1-209ENST00000469006 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
SNED1-209ENST00000469006 FLRT1Q9NZU1 646 aa17.73■□□□□ 0.43
SNED1-209ENST00000469006 VCAM1P19320 739 aa17.72■□□□□ 0.43
SNED1-209ENST00000469006 USP14P54578 494 aa17.72■□□□□ 0.43
SNED1-209ENST00000469006 MFSD14CQ5VZR4 134 aa17.72■□□□□ 0.43
SNED1-209ENST00000469006 CERS3Q8IU89 383 aa17.72■□□□□ 0.43
SNED1-209ENST00000469006 EDC3Q96F86 508 aaKnown RBP17.72■□□□□ 0.43
SNED1-209ENST00000469006 EHD4Q9H223 541 aa17.72■□□□□ 0.43
SNED1-209ENST00000469006 SERPINB13Q9UIV8 391 aa17.72■□□□□ 0.43
SNED1-209ENST00000469006 SLC15A5A6NIM6 579 aa17.71■□□□□ 0.43
SNED1-209ENST00000469006 PTPREP23469 700 aa17.71■□□□□ 0.43
SNED1-209ENST00000469006 ATP8B2P98198 1209 aa17.71■□□□□ 0.43
SNED1-209ENST00000469006 CATSPERGQ6ZRH7 1159 aa17.71■□□□□ 0.43
SNED1-209ENST00000469006 MAGEB6Q8N7X4 407 aa17.71■□□□□ 0.43
SNED1-209ENST00000469006 ACER1Q8TDN7 264 aa17.71■□□□□ 0.43
SNED1-209ENST00000469006 SENP6Q9GZR1 1112 aaPredicted RBP17.71■□□□□ 0.43
SNED1-209ENST00000469006 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
SNED1-209ENST00000469006 CCDC8Q9H0W5 538 aaPredicted RBP17.71■□□□□ 0.43
SNED1-209ENST00000469006 ABCB5Q2M3G0 1257 aa17.7■□□□□ 0.42
SNED1-209ENST00000469006 CERKLQ49MI3 558 aaPredicted RBP17.7■□□□□ 0.42
SNED1-209ENST00000469006 ZKSCAN2Q63HK3 967 aa17.7■□□□□ 0.42
SNED1-209ENST00000469006 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
SNED1-209ENST00000469006 BTBD7Q9P203 1132 aa17.7■□□□□ 0.42
SNED1-209ENST00000469006 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
SNED1-209ENST00000469006 IVNS1ABPQ9Y6Y0 642 aa17.7■□□□□ 0.42
SNED1-209ENST00000469006 DNAH12Q6ZR08 3092 aa17.69■□□□□ 0.42
SNED1-209ENST00000469006 SPDYE16A6NNV3 312 aaPredicted RBP17.69■□□□□ 0.42
SNED1-209ENST00000469006 HOXC6P09630 235 aa17.69■□□□□ 0.42
SNED1-209ENST00000469006 CNGA1P29973 690 aa17.69■□□□□ 0.42
SNED1-209ENST00000469006 ATP2B2Q01814 1243 aa17.69■□□□□ 0.42
SNED1-209ENST00000469006 GRB14Q14449 540 aa17.69■□□□□ 0.42
SNED1-209ENST00000469006 TTC6Q86TZ1 520 aa17.69■□□□□ 0.42
SNED1-209ENST00000469006 EAF2Q96CJ1 260 aaPredicted RBP17.69■□□□□ 0.42
SNED1-209ENST00000469006 RPAP3Q9H6T3 665 aaPredicted RBP17.69■□□□□ 0.42
SNED1-209ENST00000469006 NOP58Q9Y2X3 529 aaKnown RBP17.69■□□□□ 0.42
SNED1-209ENST00000469006 NAV1Q8NEY1 1877 aa17.69■□□□□ 0.42
SNED1-209ENST00000469006 MSCO60682 206 aa17.68■□□□□ 0.42
SNED1-209ENST00000469006 CYP2C19P33261 490 aa17.68■□□□□ 0.42
SNED1-209ENST00000469006 SHMT1P34896 483 aa17.68■□□□□ 0.42
SNED1-209ENST00000469006 ATN1P54259 1190 aaPredicted RBP17.68■□□□□ 0.42
SNED1-209ENST00000469006 NPLOC4Q8TAT6 608 aa17.68■□□□□ 0.42
SNED1-209ENST00000469006 LPAR1Q92633 364 aa17.68■□□□□ 0.42
SNED1-209ENST00000469006 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
SNED1-209ENST00000469006 ANTXR1Q9H6X2 564 aa17.68■□□□□ 0.42
SNED1-209ENST00000469006 CABP5Q9NP86 173 aa17.68■□□□□ 0.42
SNED1-209ENST00000469006 DNM1LO00429 736 aa17.67■□□□□ 0.42
SNED1-209ENST00000469006 MAP3K12Q12852 859 aa17.67■□□□□ 0.42
SNED1-209ENST00000469006 TRPV1Q8NER1 839 aa17.67■□□□□ 0.42
SNED1-209ENST00000469006 ZNF236Q9UL36 1845 aa17.67■□□□□ 0.42
SNED1-209ENST00000469006 UNC80Q8N2C7 3258 aa17.66■□□□□ 0.42
SNED1-209ENST00000469006 CYBAP13498 195 aa17.66■□□□□ 0.42
SNED1-209ENST00000469006 GUCY1A2P33402 732 aa17.66■□□□□ 0.42
SNED1-209ENST00000469006 PLCD1P51178 756 aa17.66■□□□□ 0.42
SNED1-209ENST00000469006 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
SNED1-209ENST00000469006 RIOK1Q9BRS2 568 aaKnown RBP17.66■□□□□ 0.42
SNED1-209ENST00000469006 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
SNED1-209ENST00000469006 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
SNED1-209ENST00000469006 A0A0G2JMZ2 1700 aa17.65■□□□□ 0.42
SNED1-209ENST00000469006 RTP1P59025 263 aa17.65■□□□□ 0.42
SNED1-209ENST00000469006 SEPT2Q15019 361 aa17.65■□□□□ 0.42
SNED1-209ENST00000469006 TMED8Q6PL24 325 aaPredicted RBP17.65■□□□□ 0.42
SNED1-209ENST00000469006 ITPRIPQ8IWB1 547 aa17.65■□□□□ 0.42
SNED1-209ENST00000469006 GUCD1Q96NT3 240 aa17.65■□□□□ 0.42
SNED1-209ENST00000469006 PRKAG2Q9UGJ0 569 aa17.65■□□□□ 0.42
SNED1-209ENST00000469006 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
SNED1-209ENST00000469006 IGHA2P01877 340 aa17.64■□□□□ 0.41
SNED1-209ENST00000469006 POLR3DP05423 398 aaPredicted RBP17.64■□□□□ 0.41
SNED1-209ENST00000469006 ADORA2AP29274 412 aa17.64■□□□□ 0.41
SNED1-209ENST00000469006 GJC2Q5T442 439 aaPredicted RBP17.64■□□□□ 0.41
SNED1-209ENST00000469006 FAM109BQ6ICB4 259 aaPredicted RBP17.64■□□□□ 0.41
SNED1-209ENST00000469006 DPP9Q86TI2 863 aa17.64■□□□□ 0.41
SNED1-209ENST00000469006 MOV10L1Q9BXT6 1211 aaKnown RBP17.64■□□□□ 0.41
SNED1-209ENST00000469006 TANGO6Q9C0B7 1094 aa17.64■□□□□ 0.41
SNED1-209ENST00000469006 ATP11BQ9Y2G3 1177 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms