RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 PUS7LQ9H0K6 701 aaKnown RBP8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 RNF208Q9H0X6 261 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 MORF4L1Q9UBU8 362 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 SWAP70Q9UH65 585 aa8.64□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 USP17L21D6R901 530 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 RNF113AO15541 343 aaKnown RBP8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 GJB1P08034 283 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 ELNP15502 786 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 EVX2Q03828 476 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 C12orf60Q5U649 245 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 PRPF38BQ5VTL8 546 aaKnown RBP8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 CATSPERGQ6ZRH7 1159 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 TMEM179Q6ZVK1 233 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 SLC44A5Q8NCS7 719 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 DYNLL2Q96FJ2 89 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 C12orf42Q96LP6 360 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 CRBNQ96SW2 442 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 PAGR1Q9BTK6 254 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 RBPJLQ9UBG7 517 aa8.63□□□□□ -1.03
SNRPD3-205ENST00000468770 TTC41PQ6P2S7 1318 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 CYP2D7A0A087X1C5 515 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 PEX10O60683 326 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 GLRX3O76003 335 aaKnown RBP8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 INHAP05111 366 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 ZFYP08048 801 aaPredicted RBP8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 VCAM1P19320 739 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 MAPK4P31152 587 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 GUCY1A2P33402 732 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 GJA8P48165 433 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 CDK8P49336 464 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 ERVK-9P63128 1117 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 ERVK-24P63145 666 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 Q3C1V9 767 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 ANKRD45Q5TZF3 282 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 CTR9Q6PD62 1173 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 APPBP2Q92624 585 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 CCDC17Q96LX7 622 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 STRBPQ96SI9 672 aaKnown RBP8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 UNC93B1Q9H1C4 597 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 CWC22Q9HCG8 908 aaKnown RBP8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 TXNRD2Q9NNW7 524 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 GJD2Q9UKL4 321 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 LOC285556D6RIA3 1793 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 MGAMO43451 1857 aa8.62□□□□□ -1.03
SNRPD3-205ENST00000468770 TNRC18O15417 2968 aaPredicted RBP8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 A0A1W2PRG0 241 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 MINDY4BA8MYZ0 360 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 SGPL1O95470 568 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 APPP05067 770 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 AKR1B1P15121 316 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 GNAT2P19087 354 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 MX1P20591 662 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 CYP2B6P20813 491 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 CCNA1P78396 465 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 COG2Q14746 738 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 GIMAP6Q6P9H5 292 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 C16orf86Q6ZW13 317 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 OTUD7AQ8TE49 926 aaPredicted RBP8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 U2AF1L4Q8WU68 220 aaKnown RBP8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 OSBP2Q969R2 916 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 GCC1Q96CN9 775 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 RPAP3Q9H6T3 665 aaPredicted RBP8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 SH2D4AQ9H788 454 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 ARHGEF10LQ9HCE6 1279 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 HOXC10Q9NYD6 342 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 ARPP21Q9UBL0 812 aaPredicted RBP8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 RABGAP1Q9Y3P9 1069 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 DOCK3Q8IZD9 2030 aa8.61□□□□□ -1.03
SNRPD3-205ENST00000468770 BRCA2P51587 3418 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 GSG1L2A8MUP6 293 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 SMIM22K7EJ46 135 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 GPAA1O43292 621 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 TFRCP02786 760 aaKnown RBP8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 HMGCRP04035 888 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 ATP2B2Q01814 1243 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 ICA1Q05084 483 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 HDAC1Q13547 482 aaPredicted RBP8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 AAMPQ13685 434 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 SBK1Q52WX2 424 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 WDR78Q5VTH9 848 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 GPR142Q7Z601 462 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 PLEKHH3Q7Z736 793 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 STK11IPQ8N1F8 1099 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 PI4K2BQ8TCG2 481 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 SOCS4Q8WXH5 440 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 LPAR1Q92633 364 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 DEFB118Q96PH6 123 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 FSD1Q9BTV5 496 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 TANGO6Q9C0B7 1094 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 PORCNQ9H237 461 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 KANSL2Q9H9L4 492 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 MKNK2Q9HBH9 465 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 RBBP6Q7Z6E9 1792 aaKnown RBP8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 NAV1Q8NEY1 1877 aa8.6□□□□□ -1.03
SNRPD3-205ENST00000468770 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 PATL2C9JE40 543 aaKnown RBP8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 RAD21O60216 631 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms