RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RGS22Q8NE09 1264 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 AIFM3Q96NN9 605 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 TRIM34Q9BYJ4 488 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 TAOK2Q9UL54 1235 aa22.04■■□□□ 1.12
SMC4-209ENST00000468653 DDTLA6NHG4 134 aaPredicted RBP22.03■■□□□ 1.12
SMC4-209ENST00000468653 KIF5BP33176 963 aa22.03■■□□□ 1.12
SMC4-209ENST00000468653 TMEM87AQ8NBN3 555 aa22.03■■□□□ 1.12
SMC4-209ENST00000468653 DEXIO95424 95 aa22.02■■□□□ 1.12
SMC4-209ENST00000468653 KLHL40Q2TBA0 621 aa22.02■■□□□ 1.12
SMC4-209ENST00000468653 TMEM47Q9BQJ4 181 aa22.02■■□□□ 1.12
SMC4-209ENST00000468653 RNF26Q9BY78 433 aaPredicted RBP22.02■■□□□ 1.12
SMC4-209ENST00000468653 GJB4Q9NTQ9 266 aa22.02■■□□□ 1.12
SMC4-209ENST00000468653 ZNF70Q9UC06 446 aaPredicted RBP22.02■■□□□ 1.12
SMC4-209ENST00000468653 TCHHQ07283 1943 aa22.02■■□□□ 1.12
SMC4-209ENST00000468653 CLRN2A0PK11 232 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 PLEKHA8P1O95397 391 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 AKR1B1P15121 316 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 SHMT1P34896 483 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 EIF6P56537 245 aaKnown RBP22.02■■□□□ 1.11
SMC4-209ENST00000468653 TMTC3Q6ZXV5 915 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 SH3BP5LQ7L8J4 393 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 CEP95Q96GE4 821 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 MAP3K14Q99558 947 aa22.02■■□□□ 1.11
SMC4-209ENST00000468653 FHDC1Q9C0D6 1143 aaPredicted RBP22.02■■□□□ 1.11
SMC4-209ENST00000468653 GZF1Q9H116 711 aaPredicted RBP22.02■■□□□ 1.11
SMC4-209ENST00000468653 ARFGEF1Q9Y6D6 1849 aa22.01■■□□□ 1.11
SMC4-209ENST00000468653 TCP10L2B9ZVM9 353 aa22.01■■□□□ 1.11
SMC4-209ENST00000468653 FOXP4Q8IVH2 680 aaPredicted RBP22.01■■□□□ 1.11
SMC4-209ENST00000468653 MTMR14Q8NCE2 650 aa22.01■■□□□ 1.11
SMC4-209ENST00000468653 GOLGB1Q14789 3259 aaKnown RBP22.01■■□□□ 1.11
SMC4-209ENST00000468653 PLIN4Q96Q06 1357 aa22.01■■□□□ 1.11
SMC4-209ENST00000468653 RPS12P25398 132 aaKnown RBP22■■□□□ 1.11
SMC4-209ENST00000468653 GUCY1A2P33402 732 aa22■■□□□ 1.11
SMC4-209ENST00000468653 KRT40Q6A162 431 aa22■■□□□ 1.11
SMC4-209ENST00000468653 CCDC17Q96LX7 622 aa22■■□□□ 1.11
SMC4-209ENST00000468653 TFIP11Q9UBB9 837 aaKnown RBP22■■□□□ 1.11
SMC4-209ENST00000468653 UBE2Q2LH0YL09 131 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 MYO1BO43795 1136 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 TOP1P11387 765 aaKnown RBP21.99■■□□□ 1.11
SMC4-209ENST00000468653 MMP14P50281 582 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 FUT2Q10981 343 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 SPDYE2Q495Y8 402 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 ARHGAP27Q6ZUM4 889 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMC4-209ENST00000468653 SCAND2PQ9GZW5 306 aaPredicted RBP21.99■■□□□ 1.11
SMC4-209ENST00000468653 MPHOSPH10O00566 681 aaKnown RBP21.99■■□□□ 1.11
SMC4-209ENST00000468653 PRPF3O43395 683 aaKnown RBP21.99■■□□□ 1.11
SMC4-209ENST00000468653 MBD3O95983 291 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 PRELPP51888 382 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 GRM4Q14833 912 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 MYOZ2Q9NPC6 264 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 MTMR4Q9NYA4 1195 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 CFAP45Q9UL16 551 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 MTMR7Q9Y216 660 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 V9GY48 417 aaPredicted RBP21.99■■□□□ 1.11
SMC4-209ENST00000468653 ATRNL1Q5VV63 1379 aa21.99■■□□□ 1.11
SMC4-209ENST00000468653 FZD9O00144 591 aa21.98■■□□□ 1.11
SMC4-209ENST00000468653 GNAQP50148 359 aa21.98■■□□□ 1.11
SMC4-209ENST00000468653 GSE1Q14687 1217 aa21.98■■□□□ 1.11
SMC4-209ENST00000468653 SRBD1Q8N5C6 995 aaKnown RBP21.98■■□□□ 1.11
SMC4-209ENST00000468653 GPT2Q8TD30 523 aa21.98■■□□□ 1.11
SMC4-209ENST00000468653 ZNF396Q96N95 335 aaPredicted RBP21.98■■□□□ 1.11
SMC4-209ENST00000468653 DNAJC18Q9H819 358 aa21.98■■□□□ 1.11
SMC4-209ENST00000468653 VEZTQ9HBM0 779 aa21.98■■□□□ 1.11
SMC4-209ENST00000468653 GJA3Q9Y6H8 435 aa21.98■■□□□ 1.11
SMC4-209ENST00000468653 COL2A1P02458 1487 aaPredicted RBP21.97■■□□□ 1.11
SMC4-209ENST00000468653 FAM196BA6NMK8 535 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 GADD45BO75293 160 aaPredicted RBP21.97■■□□□ 1.11
SMC4-209ENST00000468653 SLURP2P0DP57 97 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 NOVP48745 357 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 KIF23Q02241 960 aaPredicted RBP21.97■■□□□ 1.11
SMC4-209ENST00000468653 GNL2Q13823 731 aaKnown RBP21.97■■□□□ 1.11
SMC4-209ENST00000468653 BRAPQ7Z569 592 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 FAM151AQ8WW52 585 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 SPATA32Q96LK8 384 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 CSRNP1Q96S65 589 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 MYH8P13535 1937 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 IGKV6D-41A0A0C4DH26 115 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 CERKLQ49MI3 558 aaPredicted RBP21.97■■□□□ 1.11
SMC4-209ENST00000468653 FKBP1CQ5VVH2 108 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 ATL3Q6DD88 541 aa21.97■■□□□ 1.11
SMC4-209ENST00000468653 CNTNAP5Q8WYK1 1306 aa21.96■■□□□ 1.11
SMC4-209ENST00000468653 SHTN1A0MZ66 631 aa21.96■■□□□ 1.11
SMC4-209ENST00000468653 XBP1P17861 261 aa21.96■■□□□ 1.11
SMC4-209ENST00000468653 UBE2HP62256 183 aa21.96■■□□□ 1.11
SMC4-209ENST00000468653 PPP4R3BQ5MIZ7 849 aa21.96■■□□□ 1.11
SMC4-209ENST00000468653 ZBED3Q96IU2 234 aaPredicted RBP21.96■■□□□ 1.11
SMC4-209ENST00000468653 MAD2L2Q9UI95 211 aa21.96■■□□□ 1.11
SMC4-209ENST00000468653 hCG_1642624A0A1W2PR95 340 aa21.95■■□□□ 1.1
SMC4-209ENST00000468653 WNT10BO00744 389 aa21.95■■□□□ 1.1
SMC4-209ENST00000468653 TTLL1O95922 423 aa21.95■■□□□ 1.1
SMC4-209ENST00000468653 GMPSP49915 693 aaPredicted RBP21.95■■□□□ 1.1
SMC4-209ENST00000468653 ZNF280AP59817 542 aaPredicted RBP21.95■■□□□ 1.1
SMC4-209ENST00000468653 SAFBQ15424 915 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMC4-209ENST00000468653 STAG2Q8N3U4 1231 aa21.95■■□□□ 1.1
SMC4-209ENST00000468653 CLIP2Q9UDT6 1046 aa21.95■■□□□ 1.1
SMC4-209ENST00000468653 PKN1Q16512 942 aa21.94■■□□□ 1.1
SMC4-209ENST00000468653 NBPF9Q3BBW0 867 aa21.94■■□□□ 1.1
SMC4-209ENST00000468653 TPRNQ4KMQ1 711 aa21.94■■□□□ 1.1
SMC4-209ENST00000468653 RBM26Q5T8P6 1007 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms