RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 ZNF512BQ96KM6 892 aaPredicted RBP8.58□□□□□ -1.04
MSL3-210ENST00000468149 JAG2Q9Y219 1238 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 LAMB1P07942 1786 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 POTEFA5A3E0 1075 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 HOXA2O43364 376 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 SH3BP5O60239 455 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 ARID5AQ03989 594 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 SCARF1Q14162 830 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 CCDC158Q5M9N0 1113 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 TAS1R3Q7RTX0 852 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 RPUSD2Q8IZ73 545 aaKnown RBP8.58□□□□□ -1.04
MSL3-210ENST00000468149 EAF2Q96CJ1 260 aaPredicted RBP8.58□□□□□ -1.04
MSL3-210ENST00000468149 GGA3Q9NZ52 723 aa8.58□□□□□ -1.04
MSL3-210ENST00000468149 G3BP2Q9UN86 482 aaKnown RBP8.58□□□□□ -1.04
MSL3-210ENST00000468149 TTF2Q9UNY4 1162 aaKnown RBP8.58□□□□□ -1.04
MSL3-210ENST00000468149 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
MSL3-210ENST00000468149 F8W031 263 aaPredicted RBP8.57□□□□□ -1.04
MSL3-210ENST00000468149 MYO1BO43795 1136 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 S100BP04271 92 aaPredicted RBP8.57□□□□□ -1.04
MSL3-210ENST00000468149 UQCRFS1P1P0C7P4 283 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 CHAF1AQ13111 956 aaPredicted RBP8.57□□□□□ -1.04
MSL3-210ENST00000468149 DLGAP5Q15398 846 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 NBPF9Q3BBW0 867 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 ANGEL2Q5VTE6 544 aaKnown RBP8.57□□□□□ -1.04
MSL3-210ENST00000468149 KRT26Q7Z3Y9 468 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
MSL3-210ENST00000468149 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 DCTPP1Q9H773 170 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 CEP350Q5VT06 3117 aa8.57□□□□□ -1.04
MSL3-210ENST00000468149 PAPPA2Q9BXP8 1791 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 ARHGAP4P98171 946 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 CFAP100Q494V2 611 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 HHIPL2Q6UWX4 724 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 SPATA5Q8NB90 893 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 TEKT1Q969V4 418 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 NAP1L5Q96NT1 182 aaPredicted RBP8.56□□□□□ -1.04
MSL3-210ENST00000468149 DBNDD2Q9BQY9 259 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 GLIS2Q9BZE0 524 aaPredicted RBP8.56□□□□□ -1.04
MSL3-210ENST00000468149 DDX56Q9NY93 547 aaKnown RBP8.56□□□□□ -1.04
MSL3-210ENST00000468149 DBNLQ9UJU6 430 aaKnown RBP8.56□□□□□ -1.04
MSL3-210ENST00000468149 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.56□□□□□ -1.04
MSL3-210ENST00000468149 PCNTO95613 3336 aa8.56□□□□□ -1.04
MSL3-210ENST00000468149 MYH1P12882 1939 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
MSL3-210ENST00000468149 PAX3P23760 479 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 PRDX5P30044 214 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 ZNF76P36508 570 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 MCAMP43121 646 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 CRKP46108 304 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 RBM5P52756 815 aaKnown RBP eCLIP8.55□□□□□ -1.04
MSL3-210ENST00000468149 TBX4P57082 545 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 ZFYVE27Q5T4F4 411 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 AACSQ86V21 672 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 APOBEC3FQ8IUX4 373 aaKnown RBP8.55□□□□□ -1.04
MSL3-210ENST00000468149 PRMT6Q96LA8 375 aaPredicted RBP8.55□□□□□ -1.04
MSL3-210ENST00000468149 ZDHHC15Q96MV8 337 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 LRRCC1Q9C099 1032 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 MAF1Q9H063 256 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 HMG20BQ9P0W2 317 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 OTOFQ9HC10 1997 aa8.55□□□□□ -1.04
MSL3-210ENST00000468149 ASTN2O75129 1339 aaPredicted RBP8.55□□□□□ -1.04
MSL3-210ENST00000468149 TRAF5O00463 557 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 DNAJC6O75061 913 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 DPYDQ12882 1025 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 HDAC1Q13547 482 aaPredicted RBP8.54□□□□□ -1.04
MSL3-210ENST00000468149 GRIK5Q16478 980 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 CST9Q5W186 159 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 TTC13Q8NBP0 860 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 FAM161BQ96MY7 647 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 CCDC8Q9H0W5 538 aaPredicted RBP8.54□□□□□ -1.04
MSL3-210ENST00000468149 SPC25Q9HBM1 224 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 PPP2R3BQ9Y5P8 575 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 THSD7BQ9C0I4 1608 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
MSL3-210ENST00000468149 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
MSL3-210ENST00000468149 RHBDL3P58872 404 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 TNFAIP1Q13829 316 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 C4orf46Q504U0 113 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 USP48Q86UV5 1035 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 SLF2Q8IX21 1173 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 SLAIN1Q8ND83 568 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
MSL3-210ENST00000468149 STAG1Q8WVM7 1258 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 TSC1Q92574 1164 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 FAM163AQ96GL9 167 aaPredicted RBP8.54□□□□□ -1.04
MSL3-210ENST00000468149 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
MSL3-210ENST00000468149 ABCF2Q9UG63 623 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 PARP2Q9UGN5 583 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 PRR12Q9ULL5 1215 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 PCDHAC2Q9Y5I4 1007 aa8.54□□□□□ -1.04
MSL3-210ENST00000468149 MYH8P13535 1937 aa8.53□□□□□ -1.04
MSL3-210ENST00000468149 ADM5C9JUS6 153 aa8.53□□□□□ -1.04
MSL3-210ENST00000468149 ENPP3O14638 875 aa8.53□□□□□ -1.04
MSL3-210ENST00000468149 STK10O94804 968 aaKnown RBP8.53□□□□□ -1.04
MSL3-210ENST00000468149 CELF2O95319 508 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms