RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MAGEB6P1A0A0J9YX57 407 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L15C9J2P7 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L13C9JLJ4 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L11C9JVI0 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L18D6R9N7 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L22D6RA61 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L17D6RBQ6 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L19D6RCP7 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L20D6RJB6 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 SOX1O00570 391 aaPredicted RBP20.96■□□□□ 0.95
TRIM56-203ENST00000467847 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP14P54578 494 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 USP17L24Q0WX57 530 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 MAP3K21Q5TCX8 1036 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 POTEEQ6S8J3 1075 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 PLEKHH3Q7Z736 793 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 TRMT44Q8IYL2 757 aaKnown RBP20.96■□□□□ 0.95
TRIM56-203ENST00000467847 NBPF3Q9H094 633 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 CWC22Q9HCG8 908 aaKnown RBP20.96■□□□□ 0.95
TRIM56-203ENST00000467847 CABP5Q9NP86 173 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 COL6A3P12111 3177 aa20.96■□□□□ 0.95
TRIM56-203ENST00000467847 APBB1O00213 710 aa20.95■□□□□ 0.94
TRIM56-203ENST00000467847 POLR3DP05423 398 aaPredicted RBP20.95■□□□□ 0.94
TRIM56-203ENST00000467847 RGS2P41220 211 aa20.95■□□□□ 0.94
TRIM56-203ENST00000467847 PLCD1P51178 756 aa20.95■□□□□ 0.94
TRIM56-203ENST00000467847 SLC9C2Q5TAH2 1124 aa20.95■□□□□ 0.94
TRIM56-203ENST00000467847 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
TRIM56-203ENST00000467847 KIAA1683Q9H0B3 1180 aa20.95■□□□□ 0.94
TRIM56-203ENST00000467847 RABGAP1Q9Y3P9 1069 aa20.95■□□□□ 0.94
TRIM56-203ENST00000467847 LAMA3Q16787 3333 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 MS4A1P11836 297 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 PDE6AP16499 860 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 VCAM1P19320 739 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 SHMT1P34896 483 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 MORN1Q5T089 497 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 C7orf61Q8IZ16 206 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 CLASRPQ8N2M8 674 aaKnown RBP20.94■□□□□ 0.94
TRIM56-203ENST00000467847 ACER1Q8TDN7 264 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 USP6NLQ92738 828 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 CRNKL1Q9BZJ0 848 aaKnown RBP20.94■□□□□ 0.94
TRIM56-203ENST00000467847 C11orf49Q9H6J7 331 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 OGDHLQ9ULD0 1010 aa20.94■□□□□ 0.94
TRIM56-203ENST00000467847 CCNA1P78396 465 aa20.93■□□□□ 0.94
TRIM56-203ENST00000467847 CACNB2Q08289 660 aaPredicted RBP20.93■□□□□ 0.94
TRIM56-203ENST00000467847 CCL14Q16627 93 aa20.93■□□□□ 0.94
TRIM56-203ENST00000467847 CATSPERGQ6ZRH7 1159 aa20.93■□□□□ 0.94
TRIM56-203ENST00000467847 KIF1BPQ96EK5 621 aa20.93■□□□□ 0.94
TRIM56-203ENST00000467847 DNAJC2Q99543 621 aaKnown RBP20.93■□□□□ 0.94
TRIM56-203ENST00000467847 APBA2Q99767 749 aa20.93■□□□□ 0.94
TRIM56-203ENST00000467847 BCL11AQ9H165 835 aa20.93■□□□□ 0.94
TRIM56-203ENST00000467847 GOLIM4O00461 696 aa20.92■□□□□ 0.94
TRIM56-203ENST00000467847 CNMDO75829 334 aa20.92■□□□□ 0.94
TRIM56-203ENST00000467847 IFIT2P09913 472 aaKnown RBP20.92■□□□□ 0.94
TRIM56-203ENST00000467847 RPAP2Q8IXW5 612 aaPredicted RBP20.92■□□□□ 0.94
TRIM56-203ENST00000467847 MCM9Q9NXL9 1143 aa20.92■□□□□ 0.94
TRIM56-203ENST00000467847 ZNF532Q9HCE3 1301 aa20.92■□□□□ 0.94
TRIM56-203ENST00000467847 CUL9Q8IWT3 2517 aa20.92■□□□□ 0.94
TRIM56-203ENST00000467847 HMMRO75330 724 aa20.91■□□□□ 0.94
TRIM56-203ENST00000467847 GLRX3O76003 335 aaKnown RBP20.91■□□□□ 0.94
TRIM56-203ENST00000467847 MYH8P13535 1937 aa20.91■□□□□ 0.94
TRIM56-203ENST00000467847 WDR78Q5VTH9 848 aa20.91■□□□□ 0.94
TRIM56-203ENST00000467847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.91■□□□□ 0.94
TRIM56-203ENST00000467847 MPHOSPH10O00566 681 aaKnown RBP20.9■□□□□ 0.94
TRIM56-203ENST00000467847 CCND3P30281 292 aaPredicted RBP20.9■□□□□ 0.94
TRIM56-203ENST00000467847 GUCY1A2P33402 732 aa20.9■□□□□ 0.94
TRIM56-203ENST00000467847 GABPAQ06546 454 aa20.9■□□□□ 0.94
TRIM56-203ENST00000467847 MAP2K5Q13163 448 aa20.9■□□□□ 0.94
TRIM56-203ENST00000467847 SEPT2Q15019 361 aa20.9■□□□□ 0.94
TRIM56-203ENST00000467847 DEFB123Q8N688 67 aa20.9■□□□□ 0.94
TRIM56-203ENST00000467847 RPAP3Q9H6T3 665 aaPredicted RBP20.9■□□□□ 0.94
TRIM56-203ENST00000467847 ZMYND8Q9ULU4 1186 aaPredicted RBP20.9■□□□□ 0.94
TRIM56-203ENST00000467847 DDX19BQ9UMR2 479 aa20.9■□□□□ 0.94
TRIM56-203ENST00000467847 TCRBV5S4A2TA0A5A2 114 aa20.89■□□□□ 0.93
TRIM56-203ENST00000467847 EVX2Q03828 476 aa20.89■□□□□ 0.93
TRIM56-203ENST00000467847 LBX2Q6XYB7 198 aa20.89■□□□□ 0.93
TRIM56-203ENST00000467847 LCORLQ8N3X6 602 aa20.89■□□□□ 0.93
TRIM56-203ENST00000467847 SDR42E1Q8WUS8 393 aa20.89■□□□□ 0.93
TRIM56-203ENST00000467847 EDC3Q96F86 508 aaKnown RBP20.89■□□□□ 0.93
TRIM56-203ENST00000467847 COG6Q9Y2V7 657 aa20.89■□□□□ 0.93
TRIM56-203ENST00000467847 FRMPD3Q5JV73 1810 aa20.88■□□□□ 0.93
TRIM56-203ENST00000467847 SLC15A5A6NIM6 579 aa20.88■□□□□ 0.93
TRIM56-203ENST00000467847 SPDYE16A6NNV3 312 aaPredicted RBP20.88■□□□□ 0.93
TRIM56-203ENST00000467847 RAB11FIP3O75154 756 aa20.88■□□□□ 0.93
TRIM56-203ENST00000467847 SIRT2Q8IXJ6 389 aa20.88■□□□□ 0.93
TRIM56-203ENST00000467847 DCP1AQ9NPI6 582 aaPredicted RBP20.88■□□□□ 0.93
TRIM56-203ENST00000467847 ZBTB40Q9NUA8 1239 aa20.88■□□□□ 0.93
TRIM56-203ENST00000467847 BTBD7Q9P203 1132 aa20.88■□□□□ 0.93
TRIM56-203ENST00000467847 IVNS1ABPQ9Y6Y0 642 aa20.88■□□□□ 0.93
TRIM56-203ENST00000467847 PFASO15067 1338 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 BAZ2AQ9UIF9 1905 aaKnown RBP20.87■□□□□ 0.93
TRIM56-203ENST00000467847 PTPREP23469 700 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 MFSD14CQ5VZR4 134 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 LHX8Q68G74 356 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 GPR153Q6NV75 609 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 GDF15Q99988 308 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 ARMT1Q9H993 441 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 PAG1Q9NWQ8 432 aa20.87■□□□□ 0.93
TRIM56-203ENST00000467847 CYP2D6P10635 497 aa20.86■□□□□ 0.93
TRIM56-203ENST00000467847 SYN1P17600 705 aa20.86■□□□□ 0.93
TRIM56-203ENST00000467847 BMP8BP34820 402 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms