RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TRPM7Q96QT4 1865 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 ERICH2A1L162 156 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 SH2B2O14492 632 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-204ENST00000467731 GH2P01242 217 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 YY1P25490 414 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 JAG1P78504 1218 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 ABCB5Q2M3G0 1257 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 TMEM67Q5HYA8 995 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 CEP95Q96GE4 821 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 WRNIP1Q96S55 665 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 ZNF341Q9BYN7 854 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 LY9Q9HBG7 655 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 SENP2Q9HC62 589 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
SCAF4-204ENST00000467731 ANGEL1Q9UNK9 670 aaKnown RBP8.06□□□□□ -1.12
SCAF4-204ENST00000467731 KIF3CO14782 793 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 INPP5BP32019 993 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 NF2P35240 595 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 ANP32AP39687 249 aaKnown RBP8.05□□□□□ -1.12
SCAF4-204ENST00000467731 CAP2P40123 477 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 SEC23AQ15436 765 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 FBXL16Q8N461 479 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 KLRG1Q96E93 195 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 TCP11L1Q9NUJ3 509 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-204ENST00000467731 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-204ENST00000467731 USP2O75604 605 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-204ENST00000467731 LIFRP42702 1097 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 WTAPQ15007 396 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 SEPT2Q15019 361 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 RAB3GAP1Q15042 981 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 IFIT1BQ5T764 474 aaKnown RBP8.05□□□□□ -1.12
SCAF4-204ENST00000467731 RCSD1Q6JBY9 416 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 TMEM179Q6ZVK1 233 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 ZKSCAN4Q969J2 545 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-204ENST00000467731 MTA3Q9BTC8 594 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 ALDH8A1Q9H2A2 487 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-204ENST00000467731 ZNF408Q9H9D4 720 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 CABP5Q9NP86 173 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 ZBTB21Q9ULJ3 1066 aa8.05□□□□□ -1.12
SCAF4-204ENST00000467731 IGKV6D-41A0A0C4DH26 115 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 NCLP19338 710 aaKnown RBP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 GUCY1A2P33402 732 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 APOBRQ0VD83 1088 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 ANKRD1Q15327 319 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 MTMR4Q9NYA4 1195 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 ZNF112Q9UJU3 913 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 PHIPQ8WWQ0 1821 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 CTNND1O60716 968 aaKnown RBP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 ITGBL1O95965 494 aaPredicted RBP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 ASNSP08243 561 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 MOB2Q70IA6 237 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 SGMS1Q86VZ5 419 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 ZNF784Q8NCA9 323 aaPredicted RBP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 SNX21Q969T3 373 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 TTLL1O95922 423 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 ICA1Q05084 483 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 TTLL12Q14166 644 aaPredicted RBP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 NFXL1Q6ZNB6 911 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 CCDC84Q86UT8 332 aaPredicted RBP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 DGKHQ86XP1 1220 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 SECISBP2LQ93073 1101 aaKnown RBP8.04□□□□□ -1.12
SCAF4-204ENST00000467731 KANSL2Q9H9L4 492 aa8.04□□□□□ -1.12
SCAF4-204ENST00000467731 BAZ2BQ9UIF8 2168 aaKnown RBP8.03□□□□□ -1.12
SCAF4-204ENST00000467731 KLF18A0A0U1RQI7 1052 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 CCDC69A6NI79 296 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 LARGE1O95461 756 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 IREB2P48200 963 aaKnown RBP8.03□□□□□ -1.12
SCAF4-204ENST00000467731 NOVP48745 357 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 MCM2P49736 904 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 ME3Q16798 604 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 CCDC178Q5BJE1 867 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 APOA5Q6Q788 366 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 RAB11FIP4Q86YS3 637 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 HSCBQ8IWL3 235 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 TMTC2Q8N394 836 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 TMEM47Q9BQJ4 181 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 MYL10Q9BUA6 226 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 CLIP2Q9UDT6 1046 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 LIMCH1Q9UPQ0 1083 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
SCAF4-204ENST00000467731 CELF2O95319 508 aaKnown RBP8.03□□□□□ -1.12
SCAF4-204ENST00000467731 EEF2P13639 858 aaKnown RBP8.03□□□□□ -1.12
SCAF4-204ENST00000467731 RXRAP19793 462 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 EVCP57679 992 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 STK3Q13188 491 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 VGLL4Q14135 290 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 MAP3K11Q16584 847 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.03□□□□□ -1.12
SCAF4-204ENST00000467731 MICU3Q86XE3 530 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 SIAH1Q8IUQ4 282 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 SCYL3Q8IZE3 742 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 KAT14Q9H8E8 782 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 SLC12A7Q9Y666 1083 aa8.03□□□□□ -1.12
SCAF4-204ENST00000467731 PTPRFP10586 1907 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms