RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 MFAP3LO75121 409 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 SEC31AO94979 1220 aaKnown RBP11.05□□□□□ -0.64
APTX-214ENST00000467331 MBD4O95243 580 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 SLC5A1P13866 664 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 GRIN1Q05586 938 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 TRIM14Q14142 442 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 TOM1L2Q6ZVM7 507 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 PPFIBP1Q86W92 1011 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 MYL10Q9BUA6 226 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 MRPL44Q9H9J2 332 aaKnown RBP11.05□□□□□ -0.64
APTX-214ENST00000467331 SAMSN1Q9NSI8 373 aaKnown RBP11.05□□□□□ -0.64
APTX-214ENST00000467331 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 MYH2Q9UKX2 1941 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 ERICH2A1L162 156 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 LRRC10BA6NIK2 292 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 IRS4O14654 1257 aaPredicted RBP11.05□□□□□ -0.64
APTX-214ENST00000467331 KIF5CO60282 957 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 XBP1P17861 261 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 CHMP4BP1P59074 171 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 TMED8Q6PL24 325 aaPredicted RBP11.05□□□□□ -0.64
APTX-214ENST00000467331 IQUBQ8NA54 791 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
APTX-214ENST00000467331 DDX17Q92841 729 aaKnown RBP11.05□□□□□ -0.64
APTX-214ENST00000467331 CSRNP2Q9H175 543 aa11.05□□□□□ -0.64
APTX-214ENST00000467331 TRIM75PA6NK02 468 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 SPAG1Q07617 926 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 DPYDQ12882 1025 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 LONRF2Q1L5Z9 754 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 FILIP1LQ4L180 1135 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 RAD9BQ6WBX8 426 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 DNAJC10Q8IXB1 793 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 TRMT44Q8IYL2 757 aaKnown RBP11.04□□□□□ -0.64
APTX-214ENST00000467331 ZNF654Q8IZM8 581 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 IGSF22Q8N9C0 903 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 FANCBQ8NB91 859 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 LIMA1Q9UHB6 759 aaKnown RBP11.04□□□□□ -0.64
APTX-214ENST00000467331 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 DUOX1Q9NRD9 1551 aa11.04□□□□□ -0.64
APTX-214ENST00000467331 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 PCP11498 1178 aaKnown RBP11.03□□□□□ -0.64
APTX-214ENST00000467331 HNRNPH2P55795 449 aaKnown RBP11.03□□□□□ -0.64
APTX-214ENST00000467331 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 SEC23AQ15436 765 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 WHAMMP3Q1A5X7 153 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 TMTC1Q8IUR5 882 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 MAGEB6Q8N7X4 407 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 XIRP1Q702N8 1843 aaKnown RBP11.03□□□□□ -0.64
APTX-214ENST00000467331 ERICH4A6NGS2 130 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 SOWAHDA6NJG2 315 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 PPP1R3GB7ZBB8 358 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
APTX-214ENST00000467331 ERLIN1O75477 346 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 RBL2Q08999 1139 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 NR5A1Q13285 461 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 RASGRF1Q13972 1273 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 BEND6Q5SZJ8 279 aaPredicted RBP11.03□□□□□ -0.64
APTX-214ENST00000467331 FAM177A1Q8N128 213 aaPredicted RBP11.03□□□□□ -0.64
APTX-214ENST00000467331 PAGE5Q96GU1 130 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
APTX-214ENST00000467331 GBP3Q9H0R5 595 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 ANKZF1Q9H8Y5 726 aa11.03□□□□□ -0.64
APTX-214ENST00000467331 KRT2P35908 639 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 FUT2Q10981 343 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 HLFQ16534 295 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 HDXQ7Z353 690 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 TNFRSF25Q93038 417 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 DESI2Q9BSY9 194 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 ARMT1Q9H993 441 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 SEC31BQ9NQW1 1179 aa11.02□□□□□ -0.64
APTX-214ENST00000467331 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.64
APTX-214ENST00000467331 CTAGE9A4FU28 777 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 TEX33O43247 280 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 CALM1P0DP23 149 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 CALM2P0DP24 149 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 CALM3P0DP25 149 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
APTX-214ENST00000467331 TRAPPC10P48553 1259 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 TDO2P48775 406 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 IRX5P78411 483 aaPredicted RBP11.02□□□□□ -0.65
APTX-214ENST00000467331 MTF1Q14872 753 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 KARSQ15046 597 aaKnown RBP11.02□□□□□ -0.65
APTX-214ENST00000467331 GRAMD1CQ8IYS0 662 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.65
APTX-214ENST00000467331 MYH13Q9UKX3 1938 aa11.02□□□□□ -0.65
APTX-214ENST00000467331 SOS2Q07890 1332 aaPredicted RBP11.01□□□□□ -0.65
APTX-214ENST00000467331 A0A087X0B3 334 aa11.01□□□□□ -0.65
APTX-214ENST00000467331 POLR3GO15318 223 aaPredicted RBP11.01□□□□□ -0.65
APTX-214ENST00000467331 RPS6KA5O75582 802 aa11.01□□□□□ -0.65
APTX-214ENST00000467331 EIF3JO75822 258 aaKnown RBP11.01□□□□□ -0.65
APTX-214ENST00000467331 GYPCP04921 128 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms