RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SPON2Q9BUD6 331 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 TNKS2Q9H2K2 1166 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 UBP1Q9NZI7 540 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 KIAA1522Q9P206 1035 aaPredicted RBP6.32□□□□□ -1.4
VPS50-209ENST00000467326 PLAGL2Q9UPG8 496 aa6.32□□□□□ -1.4
VPS50-209ENST00000467326 ZNF865P0CJ78 1059 aaPredicted RBP6.31□□□□□ -1.4
VPS50-209ENST00000467326 ETV3P41162 512 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 CLCN7P51798 805 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 ZNF574Q6ZN55 896 aaPredicted RBP6.31□□□□□ -1.4
VPS50-209ENST00000467326 TP53INP2Q8IXH6 220 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 SLFN12Q8IYM2 578 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 RIN3Q8TB24 985 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 BRMS1Q9HCU9 246 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 PAK6Q9NQU5 681 aaPredicted RBP6.31□□□□□ -1.4
VPS50-209ENST00000467326 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
VPS50-209ENST00000467326 PRR33A8MZF0 331 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 FAM155AB1AL88 458 aaPredicted RBP6.3□□□□□ -1.4
VPS50-209ENST00000467326 CYP7A1P22680 504 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 PRKCQQ04759 706 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 MLECQ14165 292 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 NKPD1Q17RQ9 610 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 SEZ6Q53EL9 994 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 CDH24Q86UP0 819 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 WFDC3Q8IUB2 231 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 AGBL5Q8NDL9 886 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 DNAJB8Q8NHS0 232 aa6.3□□□□□ -1.4
VPS50-209ENST00000467326 UPK3BL1B0FP48 263 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 UPK3BL2E5RIL1 263 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 DNAJA2O60884 412 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 AOC3Q16853 763 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 NT5C1AQ9BXI3 368 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 VAV3Q9UKW4 847 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 SNX11Q9Y5W9 270 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 CAPN6Q9Y6Q1 641 aa6.29□□□□□ -1.4
VPS50-209ENST00000467326 CNTNAP4Q9C0A0 1308 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 CBX7O95931 251 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 MCM4P33991 863 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 CD96P40200 585 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 KIR3DL1P43629 444 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 TNNI2P48788 182 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 BNIP3Q12983 259 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 PLCL1Q15111 1095 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 OVOS1Q6IE37 1185 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 GK5Q6ZS86 529 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 CBLL1Q75N03 491 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 SPRED2Q7Z698 418 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 METTL16Q86W50 562 aaKnown RBP6.28□□□□□ -1.4
VPS50-209ENST00000467326 PHACTR4Q8IZ21 702 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 PPP1R13LQ8WUF5 828 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 NKD1Q969G9 470 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 EAF1Q96JC9 268 aaPredicted RBP6.28□□□□□ -1.4
VPS50-209ENST00000467326 GMIPQ9P107 970 aa6.28□□□□□ -1.4
VPS50-209ENST00000467326 DDX41Q9UJV9 622 aaKnown RBP6.28□□□□□ -1.4
VPS50-209ENST00000467326 PITPNM2Q9BZ72 1349 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 CHURC1-FNTBB4DL54 471 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 BIN1O00499 593 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 ATE1O95260 518 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 CD8BP10966 210 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 ZNF165P49910 485 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 RACK1P63244 317 aaKnown RBP6.27□□□□□ -1.41
VPS50-209ENST00000467326 HDLBPQ00341 1268 aaKnown RBP6.27□□□□□ -1.41
VPS50-209ENST00000467326 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
VPS50-209ENST00000467326 NT5DC4Q86YG4 428 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 SLITRK4Q8IW52 837 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 REXO1Q8N1G1 1221 aaKnown RBP6.27□□□□□ -1.41
VPS50-209ENST00000467326 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 KRTAP17-1Q9BYP8 105 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 EHMT1Q9H9B1 1298 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 PODXL2Q9NZ53 605 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.41
VPS50-209ENST00000467326 RAG1P15918 1043 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 ITGB5P18084 799 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 FUT4P22083 530 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 IKZF1Q13422 519 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 PKN1Q16512 942 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 ARSHQ5FYA8 562 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 CDKAL1Q5VV42 579 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 ZNF654Q8IZM8 581 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 RNF141Q8WVD5 230 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 ASB11Q8WXH4 323 aa6.26□□□□□ -1.41
VPS50-209ENST00000467326 H3BS24 57 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 CLCQ05315 142 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 TNK2Q07912 1038 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 BAHD1Q8TBE0 780 aaPredicted RBP6.25□□□□□ -1.41
VPS50-209ENST00000467326 PIWIL2Q8TC59 973 aaKnown RBP6.25□□□□□ -1.41
VPS50-209ENST00000467326 TMEM40Q8WWA1 233 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 HSPA12BQ96MM6 686 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 KIF2CQ99661 725 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 ASPNQ9BXN1 380 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 ST14Q9Y5Y6 855 aa6.25□□□□□ -1.41
VPS50-209ENST00000467326 SLC22A31A6NKX4 558 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 DBX1A6NMT0 343 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 MEIS3P2A8K0S8 358 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 CHMP4BP1P59074 171 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 C9orf131Q5VYM1 1079 aa6.24□□□□□ -1.41
VPS50-209ENST00000467326 NLRC3Q7RTR2 1065 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms