RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CABP4P57796 275 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 KCNA1Q09470 495 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 KRT25Q7Z3Z0 450 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 OGFOD1Q8N543 542 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 TESK2Q96S53 571 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 TAOK3Q9H2K8 898 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 FRRS1LQ9P0K9 344 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 NARFQ9UHQ1 456 aa7.47□□□□□ -1.21
PTCD3-207ENST00000467273 ARFGEF2Q9Y6D5 1785 aa7.46□□□□□ -1.21
PTCD3-207ENST00000467273 DDNO94850 711 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-207ENST00000467273 SERPINB2P05120 415 aa7.46□□□□□ -1.22
PTCD3-207ENST00000467273 PDE6BP35913 854 aa7.46□□□□□ -1.22
PTCD3-207ENST00000467273 ATP1A2P50993 1020 aa7.46□□□□□ -1.22
PTCD3-207ENST00000467273 CLDN10P78369 228 aa7.46□□□□□ -1.22
PTCD3-207ENST00000467273 NFIXQ14938 502 aa7.46□□□□□ -1.22
PTCD3-207ENST00000467273 AMOTQ4VCS5 1084 aa7.46□□□□□ -1.22
PTCD3-207ENST00000467273 USPL1Q5W0Q7 1092 aa7.46□□□□□ -1.22
PTCD3-207ENST00000467273 INTS5Q6P9B9 1019 aaKnown RBP7.46□□□□□ -1.22
PTCD3-207ENST00000467273 TSEN2Q8NCE0 465 aaKnown RBP7.46□□□□□ -1.22
PTCD3-207ENST00000467273 ZNF594Q96JF6 807 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-207ENST00000467273 SOS1Q07889 1333 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-207ENST00000467273 MAP2K2P36507 400 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 GP2P55259 537 aaKnown RBP7.45□□□□□ -1.22
PTCD3-207ENST00000467273 LCE1DQ5T752 114 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 SLC51AQ86UW1 340 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 ANKMY2Q8IV38 441 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 DZIP1LQ8IYY4 767 aaKnown RBP7.45□□□□□ -1.22
PTCD3-207ENST00000467273 FAM200AQ8TCP9 573 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 BRIP1Q9BX63 1249 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 HACL1Q9UJ83 578 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 COL15A1P39059 1388 aa7.45□□□□□ -1.22
PTCD3-207ENST00000467273 PATL2C9JE40 543 aaKnown RBP7.44□□□□□ -1.22
PTCD3-207ENST00000467273 ZBTB7BO15156 539 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-207ENST00000467273 C21orf2O43822 256 aa7.44□□□□□ -1.22
PTCD3-207ENST00000467273 DPYDQ12882 1025 aa7.44□□□□□ -1.22
PTCD3-207ENST00000467273 PLEKHO1Q53GL0 409 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-207ENST00000467273 DHX32Q7L7V1 743 aaKnown RBP7.44□□□□□ -1.22
PTCD3-207ENST00000467273 CNTROBQ8N137 903 aa7.44□□□□□ -1.22
PTCD3-207ENST00000467273 KRTAP4-7Q9BYR0 210 aa7.44□□□□□ -1.22
PTCD3-207ENST00000467273 SMG9Q9H0W8 520 aaKnown RBP7.44□□□□□ -1.22
PTCD3-207ENST00000467273 ABT1Q9ULW3 272 aaKnown RBP7.44□□□□□ -1.22
PTCD3-207ENST00000467273 ANKRD31Q8N7Z5 1873 aa7.44□□□□□ -1.22
PTCD3-207ENST00000467273 LTBP1Q14766 1721 aa7.44□□□□□ -1.22
PTCD3-207ENST00000467273 ST20-MTHFSA0A0A6YYL1 179 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 DLL1O00548 723 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 MED26O95402 600 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 TGFB1P01137 390 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 EPB42P16452 691 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 EPHX2P34913 555 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 MTHFSP49914 203 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 STYK1Q6J9G0 422 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 HFE2Q6ZVN8 426 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 CAPNS2Q96L46 248 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 GPR101Q96P66 508 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-207ENST00000467273 MCOLN1Q9GZU1 580 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
PTCD3-207ENST00000467273 RBM19Q9Y4C8 960 aaKnown RBP7.43□□□□□ -1.22
PTCD3-207ENST00000467273 IVNS1ABPQ9Y6Y0 642 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 COL11A2P13942 1736 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-207ENST00000467273 CARMIL3Q8ND23 1372 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 SCN11AQ9UI33 1791 aa7.43□□□□□ -1.22
PTCD3-207ENST00000467273 A0A087WZG4 1122 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 ZBTB42B2RXF5 422 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 PPM1GO15355 546 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-207ENST00000467273 DKK1O94907 266 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 CYP19A1P11511 503 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-207ENST00000467273 GLB1P16278 677 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 EIF2AK2P19525 551 aaKnown RBP7.42□□□□□ -1.22
PTCD3-207ENST00000467273 EAPPQ56P03 285 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-207ENST00000467273 C1orf141Q5JVX7 400 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 TMCO4Q5TGY1 634 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 IER5Q5VY09 327 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 ZNF530Q6P9A1 599 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-207ENST00000467273 ZNF622Q969S3 477 aaKnown RBP eCLIP7.42□□□□□ -1.229e-19■■□□□ 11.8
PTCD3-207ENST00000467273 HHIPL1Q96JK4 782 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 SIN3AQ96ST3 1273 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
PTCD3-207ENST00000467273 ZFATQ9P243 1243 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 TRPM7Q96QT4 1865 aa7.42□□□□□ -1.22
PTCD3-207ENST00000467273 SCN7AQ01118 1682 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 F8W735 103 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-207ENST00000467273 M0R2N6 131 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 MAP3K6O95382 1288 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 RARAP10276 462 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 FZD5Q13467 585 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 EIF4A2Q14240 407 aaKnown RBP7.41□□□□□ -1.22
PTCD3-207ENST00000467273 CCDC93Q567U6 631 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 PHLDB3Q6NSJ2 640 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 PRPF40BQ6NWY9 871 aaKnown RBP7.41□□□□□ -1.22
PTCD3-207ENST00000467273 GPC2Q8N158 579 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 AGGF1Q8N302 714 aaeCLIP7.41□□□□□ -1.22
PTCD3-207ENST00000467273 LARGE2Q8N3Y3 721 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 TRPM4Q8TD43 1214 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 SCG3Q8WXD2 468 aaKnown RBP7.41□□□□□ -1.22
PTCD3-207ENST00000467273 GCC1Q96CN9 775 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-207ENST00000467273 POLKQ9UBT6 870 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 RAXQ9Y2V3 346 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms